Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.12□□□□□ -0.15
UBE2AP49459 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 AC133561.1-201ENST00000568600 2415 ntBASIC14.12□□□□□ -0.15
UBE2AP49459 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UBE2AP49459 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2AP49459 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.12□□□□□ -0.15
UBE2AP49459 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.12□□□□□ -0.15
UBE2AP49459 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 DUSP8P5-201ENST00000422884 1815 ntBASIC14.12□□□□□ -0.15
UBE2AP49459 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC14.12□□□□□ -0.15
UBE2AP49459 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
UBE2AP49459 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.12□□□□□ -0.15
UBE2AP49459 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBE2AP49459 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
UBE2AP49459 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2AP49459 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2AP49459 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
UBE2AP49459 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2AP49459 MIR4281-201ENST00000580852 62 ntBASIC14.11□□□□□ -0.15
UBE2AP49459 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.11□□□□□ -0.15
UBE2AP49459 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2AP49459 PVT1_1.1-201ENST00000615125 194 ntBASIC14.11□□□□□ -0.15
UBE2AP49459 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.11□□□□□ -0.15
UBE2AP49459 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBE2AP49459 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UBE2AP49459 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC14.1□□□□□ -0.15
UBE2AP49459 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
UBE2AP49459 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.1□□□□□ -0.15
UBE2AP49459 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBE2AP49459 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2AP49459 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
UBE2AP49459 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2AP49459 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2AP49459 MIR4508-201ENST00000584178 70 ntBASIC14.09□□□□□ -0.15
UBE2AP49459 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2AP49459 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2AP49459 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.09□□□□□ -0.15
UBE2AP49459 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
UBE2AP49459 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBE2AP49459 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC14.09□□□□□ -0.15
UBE2AP49459 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC14.09□□□□□ -0.15
UBE2AP49459 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2AP49459 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
UBE2AP49459 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
UBE2AP49459 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2AP49459 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.08□□□□□ -0.16
UBE2AP49459 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2AP49459 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2AP49459 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2AP49459 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2AP49459 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
UBE2AP49459 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC14.08□□□□□ -0.16
UBE2AP49459 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
UBE2AP49459 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
UBE2AP49459 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 ALDH1A3-203ENST00000557963 1670 ntBASIC14.07□□□□□ -0.16
UBE2AP49459 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.07□□□□□ -0.16
UBE2AP49459 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.07□□□□□ -0.16
UBE2AP49459 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
UBE2AP49459 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
UBE2AP49459 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UBE2AP49459 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
UBE2AP49459 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
UBE2AP49459 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms