Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	snR44	snR44	211 nt		5.13	□□□□□ -1.59
CAF16	P43569	SPO1	YNL012W	1896 nt		5.13	□□□□□ -1.59
CAF16	P43569	BIO3	YNR058W	1443 nt		5.13	□□□□□ -1.59
CAF16	P43569	QDR3	YBR043C	2070 nt		5.12	□□□□□ -1.59
CAF16	P43569	VAC17	YCL063W	1272 nt		5.12	□□□□□ -1.59
CAF16	P43569	YDL057W	YDL057W	987 nt		5.12	□□□□□ -1.59
CAF16	P43569	DAS2	YDR020C	699 nt		5.12	□□□□□ -1.59
CAF16	P43569	DET1	YDR051C	1005 nt		5.12	□□□□□ -1.59
CAF16	P43569	YHL044W	YHL044W	708 nt		5.12	□□□□□ -1.59
CAF16	P43569	YJL028W	YJL028W	336 nt		5.12	□□□□□ -1.59
CAF16	P43569	YJL068C	YJL068C	900 nt		5.12	□□□□□ -1.59
CAF16	P43569	RPB4	YJL140W	666 nt		5.12	□□□□□ -1.59
CAF16	P43569	YUH1	YJR099W	711 nt		5.12	□□□□□ -1.59
CAF16	P43569	YLR339C	YLR339C	552 nt		5.12	□□□□□ -1.59
CAF16	P43569	YPL114W	YPL114W	420 nt		5.12	□□□□□ -1.59
CAF16	P43569	DUR1,2	YBR208C	5508 nt		5.12	□□□□□ -1.59
CAF16	P43569	KKQ8	YKL168C	2175 nt		5.12	□□□□□ -1.59
CAF16	P43569	SOF1	YLL011W	1470 nt		5.12	□□□□□ -1.59
CAF16	P43569	EUG1	YDR518W	1554 nt		5.12	□□□□□ -1.59
CAF16	P43569	HSP78	YDR258C	2436 nt		5.12	□□□□□ -1.59
CAF16	P43569	MIH1	YMR036C	1665 nt		5.12	□□□□□ -1.59
CAF16	P43569	ARN2	YHL047C	1863 nt		5.11	□□□□□ -1.59
CAF16	P43569	ATP16	YDL004W	483 nt		5.11	□□□□□ -1.59
CAF16	P43569	SPR28	YDR218C	1272 nt		5.11	□□□□□ -1.59
CAF16	P43569	RPL24B	YGR148C	468 nt		5.11	□□□□□ -1.59
CAF16	P43569	YKL162C	YKL162C	1209 nt		5.11	□□□□□ -1.59
CAF16	P43569	PRS1	YKL181W	1284 nt		5.11	□□□□□ -1.59
CAF16	P43569	SPG4	YMR107W	348 nt		5.11	□□□□□ -1.59
CAF16	P43569	YMR315W	YMR315W	1050 nt		5.11	□□□□□ -1.59
CAF16	P43569	YBL059W	YBL059W	582 nt		5.11	□□□□□ -1.59
CAF16	P43569	RHO2	YNL090W	579 nt		5.11	□□□□□ -1.59
CAF16	P43569	CAF40	YNL288W	1122 nt		5.11	□□□□□ -1.59
CAF16	P43569	WRS1	YOL097C	1299 nt		5.11	□□□□□ -1.59
CAF16	P43569	HUA2	YOR284W	732 nt		5.11	□□□□□ -1.59
CAF16	P43569	ATP20	YPR020W	348 nt		5.11	□□□□□ -1.59
CAF16	P43569	PBP2	YBR233W	1242 nt		5.11	□□□□□ -1.59
CAF16	P43569	PMS1	YNL082W	2622 nt		5.11	□□□□□ -1.59
CAF16	P43569	ERG1	YGR175C	1491 nt		5.11	□□□□□ -1.59
CAF16	P43569	NGL2	YMR285C	1548 nt		5.11	□□□□□ -1.59
CAF16	P43569	CCT8	YJL008C	1707 nt		5.11	□□□□□ -1.59
CAF16	P43569	YKR015C	YKR015C	1707 nt		5.11	□□□□□ -1.59
CAF16	P43569	NRD1	YNL251C	1728 nt		5.11	□□□□□ -1.59
CAF16	P43569	YNL095C	YNL095C	1929 nt		5.11	□□□□□ -1.59
CAF16	P43569	HSP42	YDR171W	1128 nt		5.1	□□□□□ -1.59
CAF16	P43569	MRPL35	YDR322W	1104 nt		5.1	□□□□□ -1.59
CAF16	P43569	COM2	YER130C	1332 nt		5.1	□□□□□ -1.59
CAF16	P43569	SAP155	YFR040W	3009 nt		5.1	□□□□□ -1.59
CAF16	P43569	PEF1	YGR058W	1008 nt		5.1	□□□□□ -1.59
CAF16	P43569	BTN2	YGR142W	1233 nt		5.1	□□□□□ -1.59
CAF16	P43569	BRL1	YHR036W	1416 nt		5.1	□□□□□ -1.59
CAF16	P43569	SIP5	YMR140W	1470 nt		5.1	□□□□□ -1.59
CAF16	P43569	TAF9	YMR236W	474 nt		5.1	□□□□□ -1.59
CAF16	P43569	ACC1	YNR016C	6702 nt		5.1	□□□□□ -1.59
CAF16	P43569	ETT1	YOR051C	1239 nt		5.1	□□□□□ -1.59
CAF16	P43569	TRS33	YOR115C	807 nt		5.1	□□□□□ -1.59
CAF16	P43569	LSC1	YOR142W	990 nt		5.1	□□□□□ -1.59
CAF16	P43569	YOR338W	YOR338W	1092 nt		5.1	□□□□□ -1.59
CAF16	P43569	POC4	YPL144W	447 nt		5.1	□□□□□ -1.59
CAF16	P43569	EXO1	YOR033C	2109 nt		5.09	□□□□□ -1.59
CAF16	P43569	RKM3	YBR030W	1659 nt		5.09	□□□□□ -1.59
CAF16	P43569	MIC60	YKR016W	1623 nt		5.09	□□□□□ -1.59
CAF16	P43569	SPS2	YDR522C	1509 nt		5.09	□□□□□ -1.59
CAF16	P43569	YLR108C	YLR108C	1458 nt		5.09	□□□□□ -1.59
CAF16	P43569	SEC12	YNR026C	1416 nt		5.09	□□□□□ -1.59
CAF16	P43569	IDP1	YDL066W	1287 nt		5.09	□□□□□ -1.59
CAF16	P43569	COQ4	YDR204W	1008 nt		5.09	□□□□□ -1.59
CAF16	P43569	RPL22B	YFL034C-A	369 nt		5.09	□□□□□ -1.59
CAF16	P43569	ARC15	YIL062C	465 nt		5.09	□□□□□ -1.59
CAF16	P43569	YKL153W	YKL153W	510 nt		5.09	□□□□□ -1.59
CAF16	P43569	YLL037W	YLL037W	381 nt		5.09	□□□□□ -1.59
CAF16	P43569	MDY2	YOL111C	639 nt		5.09	□□□□□ -1.59
CAF16	P43569	MRM1	YOR201C	1239 nt		5.09	□□□□□ -1.59
CAF16	P43569	UAF30	YOR295W	687 nt		5.09	□□□□□ -1.59
CAF16	P43569	TYE7	YOR344C	876 nt		5.09	□□□□□ -1.59
CAF16	P43569	ARL3	YPL051W	597 nt		5.09	□□□□□ -1.59
CAF16	P43569	RPN7	YPR108W	1290 nt		5.09	□□□□□ -1.59
CAF16	P43569	POL12	YBL035C	2118 nt		5.09	□□□□□ -1.59
CAF16	P43569	ACS2	YLR153C	2052 nt		5.09	□□□□□ -1.59
CAF16	P43569	MAL12	YGR292W	1755 nt		5.09	□□□□□ -1.6
CAF16	P43569	MAL32	YBR299W	1755 nt		5.09	□□□□□ -1.6
CAF16	P43569	OCA5	YHL029C	2040 nt		5.08	□□□□□ -1.6
CAF16	P43569	GPD2	YOL059W	1323 nt		5.08	□□□□□ -1.6
CAF16	P43569	YDL124W	YDL124W	939 nt		5.08	□□□□□ -1.6
CAF16	P43569	MEI4	YER044C-A	1227 nt		5.08	□□□□□ -1.6
CAF16	P43569	YER148W-A	YER148W-A	579 nt		5.08	□□□□□ -1.6
CAF16	P43569	RSM27	YGR215W	333 nt		5.08	□□□□□ -1.6
CAF16	P43569	BCY1	YIL033C	1251 nt		5.08	□□□□□ -1.6
CAF16	P43569	ATG5	YPL149W	885 nt		5.08	□□□□□ -1.6
CAF16	P43569	DIM1	YPL266W	957 nt		5.08	□□□□□ -1.6
CAF16	P43569	RFT1	YBL020W	1725 nt		5.08	□□□□□ -1.6
CAF16	P43569	IOC4	YMR044W	1428 nt		5.07	□□□□□ -1.6
CAF16	P43569	ADE3	YGR204W	2841 nt		5.07	□□□□□ -1.6
CAF16	P43569	PKC1	YBL105C	3456 nt		5.07	□□□□□ -1.6
CAF16	P43569	PWP1	YLR196W	1731 nt		5.07	□□□□□ -1.6
CAF16	P43569	YCR050C	YCR050C	309 nt		5.07	□□□□□ -1.6
CAF16	P43569	GPM2	YDL021W	936 nt		5.07	□□□□□ -1.6
CAF16	P43569	BUG1	YDL099W	1026 nt		5.07	□□□□□ -1.6
CAF16	P43569	UGX2	YDL169C	672 nt		5.07	□□□□□ -1.6
CAF16	P43569	YHR127W	YHR127W	732 nt		5.07	□□□□□ -1.6
CAF16	P43569	YJL218W	YJL218W	591 nt		5.07	□□□□□ -1.6

Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms