Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 LUC7YDL087C 786 nt5.02□□□□□ -1.61
RTR1P40084 REV7YIL139C 738 nt5.02□□□□□ -1.61
RTR1P40084 YJR085CYJR085C 318 nt5.02□□□□□ -1.61
RTR1P40084 MID2YLR332W 1131 nt5.02□□□□□ -1.61
RTR1P40084 SIW14YNL032W 846 nt5.02□□□□□ -1.61
RTR1P40084 DSC2YOL073C 969 nt5.02□□□□□ -1.61
RTR1P40084 RET3YPL010W 570 nt5.02□□□□□ -1.61
RTR1P40084 PSE1YMR308C 3270 nt5.01□□□□□ -1.61
RTR1P40084 MCM4YPR019W 2802 nt5.01□□□□□ -1.61
RTR1P40084 VPS73YGL104C 1461 nt5.01□□□□□ -1.61
RTR1P40084 ATH1YPR026W 3636 nt5.01□□□□□ -1.61
RTR1P40084 YGL152CYGL152C 678 nt5.01□□□□□ -1.61
RTR1P40084 CDC12YHR107C 1224 nt5.01□□□□□ -1.61
RTR1P40084 YBR056W-AYBR056W-A 201 nt5.01□□□□□ -1.61
RTR1P40084 ECM2YBR065C 1095 nt5.01□□□□□ -1.61
RTR1P40084 MBP1YDL056W 2502 nt5.01□□□□□ -1.61
RTR1P40084 CHL1YPL008W 2586 nt5.01□□□□□ -1.61
RTR1P40084 VHS2YIL135C 1311 nt5□□□□□ -1.61
RTR1P40084 KIC1YHR102W 3243 nt5□□□□□ -1.61
RTR1P40084 PRE9YGR135W 777 nt5□□□□□ -1.61
RTR1P40084 RPL8AYHL033C 771 nt5□□□□□ -1.61
RTR1P40084 HIS5YIL116W 1158 nt5□□□□□ -1.61
RTR1P40084 SHE1YBL031W 1017 nt5□□□□□ -1.61
RTR1P40084 ATG23YLR431C 1362 nt5□□□□□ -1.61
RTR1P40084 VAC7YNL054W 3498 nt5□□□□□ -1.61
RTR1P40084 VBA2YBR293W 1425 nt4.99□□□□□ -1.61
RTR1P40084 ATG1YGL180W 2694 nt4.99□□□□□ -1.61
RTR1P40084 SLD7YOR060C 774 nt4.99□□□□□ -1.61
RTR1P40084 ARO80YDR421W 2853 nt4.99□□□□□ -1.61
RTR1P40084 HPC2YBR215W 1878 nt4.98□□□□□ -1.61
RTR1P40084 VHC1YBR235W 3363 nt4.98□□□□□ -1.61
RTR1P40084 SAP155YFR040W 3009 nt4.98□□□□□ -1.61
RTR1P40084 LOS1YKL205W 3303 nt4.98□□□□□ -1.61
RTR1P40084 PXA1YPL147W 2613 nt4.97□□□□□ -1.61
RTR1P40084 PEX7YDR142C 1128 nt4.97□□□□□ -1.61
RTR1P40084 SUM1YDR310C 3189 nt4.97□□□□□ -1.61
RTR1P40084 SEC9YGR009C 1956 nt4.96□□□□□ -1.61
RTR1P40084 SRP72YPL210C 1923 nt4.96□□□□□ -1.62
RTR1P40084 YDR230WYDR230W 348 nt4.96□□□□□ -1.62
RTR1P40084 MAG1YER142C 891 nt4.96□□□□□ -1.62
RTR1P40084 ZRT1YGL255W 1131 nt4.96□□□□□ -1.62
RTR1P40084 YKL162C-AYKL162C-A 153 nt4.96□□□□□ -1.62
RTR1P40084 HRK1YOR267C 2280 nt4.96□□□□□ -1.62
RTR1P40084 YBR225WYBR225W 2703 nt4.96□□□□□ -1.62
RTR1P40084 ACE2YLR131C 2313 nt4.96□□□□□ -1.62
RTR1P40084 KRS1YDR037W 1776 nt4.96□□□□□ -1.62
RTR1P40084 NPL6YMR091C 1308 nt4.96□□□□□ -1.62
RTR1P40084 BIK1YCL029C 1323 nt4.96□□□□□ -1.62
RTR1P40084 UBA2YDR390C 1911 nt4.95□□□□□ -1.62
RTR1P40084 APM4YOL062C 1476 nt4.95□□□□□ -1.62
RTR1P40084 NCR1YPL006W 3513 nt4.95□□□□□ -1.62
RTR1P40084 CNN1YFR046C 1086 nt4.95□□□□□ -1.62
RTR1P40084 KRE9YJL174W 831 nt4.95□□□□□ -1.62
RTR1P40084 ECM1YAL059W 639 nt4.95□□□□□ -1.62
RTR1P40084 ADD37YMR184W 597 nt4.95□□□□□ -1.62
RTR1P40084 BBC1YJL020C 3474 nt4.95□□□□□ -1.62
RTR1P40084 ARH1YDR376W 1482 nt4.94□□□□□ -1.62
RTR1P40084 USA1YML029W 2517 nt4.94□□□□□ -1.62
RTR1P40084 ABF1YKL112W 2196 nt4.94□□□□□ -1.62
RTR1P40084 YGR122WYGR122W 1209 nt4.94□□□□□ -1.62
RTR1P40084 YBL036CYBL036C 774 nt4.94□□□□□ -1.62
RTR1P40084 ROD1YOR018W 2514 nt4.94□□□□□ -1.62
RTR1P40084 PPQ1YPL179W 1650 nt4.93□□□□□ -1.62
RTR1P40084 CAX4YGR036C 720 nt4.93□□□□□ -1.62
RTR1P40084 AIM21YIR003W 2040 nt4.93□□□□□ -1.62
RTR1P40084 PWR1PWR1 941 nt4.93□□□□□ -1.62
RTR1P40084 LTV1YKL143W 1392 nt4.92□□□□□ -1.62
RTR1P40084 YND1YER005W 1893 nt4.92□□□□□ -1.62
RTR1P40084 CWC2YDL209C 1020 nt4.92□□□□□ -1.62
RTR1P40084 TFB3YDR460W 966 nt4.92□□□□□ -1.62
RTR1P40084 GLE2YER107C 1098 nt4.92□□□□□ -1.62
RTR1P40084 CBT1YKL208W 816 nt4.92□□□□□ -1.62
RTR1P40084 FLD1YLR404W 858 nt4.92□□□□□ -1.62
RTR1P40084 PCL8YPL219W 1479 nt4.92□□□□□ -1.62
RTR1P40084 SIS2YKR072C 1689 nt4.92□□□□□ -1.62
RTR1P40084 THI7YLR237W 1797 nt4.91□□□□□ -1.62
RTR1P40084 COP1YDL145C 3606 nt4.91□□□□□ -1.62
RTR1P40084 RPL34AYER056C-A 366 nt4.91□□□□□ -1.62
RTR1P40084 SUP56tL(CAA)A 82 nt4.91□□□□□ -1.62
RTR1P40084 SUP53tL(CAA)C 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)DtL(CAA)D 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)G1tL(CAA)G1 82 nt4.91□□□□□ -1.62
RTR1P40084 SUP54tL(CAA)G2 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)G3tL(CAA)G3 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)KtL(CAA)K 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)LtL(CAA)L 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)MtL(CAA)M 82 nt4.91□□□□□ -1.62
RTR1P40084 tL(CAA)NtL(CAA)N 82 nt4.91□□□□□ -1.62
RTR1P40084 YHR173CYHR173C 339 nt4.91□□□□□ -1.62
RTR1P40084 YJR096WYJR096W 849 nt4.91□□□□□ -1.62
RTR1P40084 ISA1YLL027W 753 nt4.91□□□□□ -1.62
RTR1P40084 RFA2YNL312W 822 nt4.91□□□□□ -1.62
RTR1P40084 FSH3YOR280C 801 nt4.91□□□□□ -1.62
RTR1P40084 PEX19YDL065C 1029 nt4.9□□□□□ -1.63
RTR1P40084 TRM8YDL201W 861 nt4.9□□□□□ -1.63
RTR1P40084 MSW1YDR268W 1140 nt4.9□□□□□ -1.63
RTR1P40084 BAT2YJR148W 1131 nt4.9□□□□□ -1.63
RTR1P40084 YMR114CYMR114C 1107 nt4.9□□□□□ -1.63
RTR1P40084 HLJ1YMR161W 675 nt4.9□□□□□ -1.63
RTR1P40084 YBL059WYBL059W 582 nt4.9□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms