Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF1BP20333 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.79■□□□□ 0.92
TNFRSF1BP20333 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 ECEL1P1-201ENST00000373592 1742 ntBASIC20.78■□□□□ 0.92
TNFRSF1BP20333 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNFRSF1BP20333 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 KRT18P24-201ENST00000344739 1156 ntBASIC20.77■□□□□ 0.92
TNFRSF1BP20333 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFRSF1BP20333 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TNFRSF1BP20333 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFRSF1BP20333 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 AC004448.1-201ENST00000458332 883 ntBASIC20.76■□□□□ 0.91
TNFRSF1BP20333 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNFRSF1BP20333 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 AL353803.4-201ENST00000565882 1934 ntBASIC20.75■□□□□ 0.91
TNFRSF1BP20333 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFRSF1BP20333 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFRSF1BP20333 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.73■□□□□ 0.91
TNFRSF1BP20333 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TNFRSF1BP20333 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TNFRSF1BP20333 TSPY13P-201ENST00000338964 914 ntBASIC20.72■□□□□ 0.91
TNFRSF1BP20333 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms