Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP1P11279 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP1P11279 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
LAMP1P11279 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP1P11279 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LAMP1P11279 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LAMP1P11279 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.23■□□□□ 0.99
LAMP1P11279 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LAMP1P11279 AC021242.3-201ENST00000607598 1377 ntBASIC21.23■□□□□ 0.99
LAMP1P11279 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LAMP1P11279 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LAMP1P11279 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.22■□□□□ 0.99
LAMP1P11279 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LAMP1P11279 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.22■□□□□ 0.99
LAMP1P11279 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.22■□□□□ 0.99
LAMP1P11279 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
LAMP1P11279 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.22■□□□□ 0.99
LAMP1P11279 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LAMP1P11279 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LAMP1P11279 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
LAMP1P11279 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LAMP1P11279 EP400NL-214ENST00000641289 2402 ntBASIC21.21■□□□□ 0.99
LAMP1P11279 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LAMP1P11279 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.21■□□□□ 0.99
LAMP1P11279 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LAMP1P11279 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LAMP1P11279 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
LAMP1P11279 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.21■□□□□ 0.99
LAMP1P11279 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.21■□□□□ 0.99
LAMP1P11279 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LAMP1P11279 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.21■□□□□ 0.99
LAMP1P11279 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LAMP1P11279 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.2■□□□□ 0.99
LAMP1P11279 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LAMP1P11279 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMP1P11279 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMP1P11279 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LAMP1P11279 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.2■□□□□ 0.98
LAMP1P11279 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.2■□□□□ 0.98
LAMP1P11279 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.2■□□□□ 0.98
LAMP1P11279 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LAMP1P11279 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LAMP1P11279 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMP1P11279 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMP1P11279 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.19■□□□□ 0.98
LAMP1P11279 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMP1P11279 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMP1P11279 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LAMP1P11279 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LAMP1P11279 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMP1P11279 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMP1P11279 MIR6722-201ENST00000617286 78 ntBASIC21.18■□□□□ 0.98
LAMP1P11279 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMP1P11279 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMP1P11279 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.18■□□□□ 0.98
LAMP1P11279 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMP1P11279 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.18■□□□□ 0.98
LAMP1P11279 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMP1P11279 GUSBP5-202ENST00000510805 1989 ntBASIC21.17■□□□□ 0.98
LAMP1P11279 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMP1P11279 BX664725.1-201ENST00000438252 379 ntBASIC21.17■□□□□ 0.98
LAMP1P11279 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.17■□□□□ 0.98
LAMP1P11279 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LAMP1P11279 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LAMP1P11279 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMP1P11279 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMP1P11279 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.16■□□□□ 0.98
LAMP1P11279 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LAMP1P11279 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LAMP1P11279 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.15■□□□□ 0.98
LAMP1P11279 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LAMP1P11279 AC144652.1-201ENST00000609974 1624 ntBASIC21.15■□□□□ 0.98
LAMP1P11279 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LAMP1P11279 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LAMP1P11279 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.15■□□□□ 0.98
LAMP1P11279 AC005703.6-201ENST00000623265 1329 ntBASIC21.15■□□□□ 0.98
LAMP1P11279 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LAMP1P11279 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LAMP1P11279 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
LAMP1P11279 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LAMP1P11279 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.15■□□□□ 0.98
LAMP1P11279 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
LAMP1P11279 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LAMP1P11279 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.14■□□□□ 0.98
LAMP1P11279 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LAMP1P11279 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.14■□□□□ 0.98
LAMP1P11279 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms