Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 KIN4YOR233W 2403 nt3.95□□□□□ -1.78
RPL40BP0CH09 NSI1YDR026C 1713 nt3.95□□□□□ -1.78
RPL40BP0CH09 TRM44YPL030W 1704 nt3.95□□□□□ -1.78
RPL40BP0CH09 JEN1YKL217W 1851 nt3.94□□□□□ -1.78
RPL40BP0CH09 SKG6YHR149C 2205 nt3.94□□□□□ -1.78
RPL40BP0CH09 YGR266WYGR266W 2106 nt3.94□□□□□ -1.78
RPL40BP0CH09 MSC7YHR039C 1935 nt3.94□□□□□ -1.78
RPL40BP0CH09 CBP3YPL215W 1008 nt3.94□□□□□ -1.78
RPL40BP0CH09 PMT5YDL093W 2232 nt3.94□□□□□ -1.78
RPL40BP0CH09 TOG1YER184C 2385 nt3.94□□□□□ -1.78
RPL40BP0CH09 UPC2YDR213W 2742 nt3.93□□□□□ -1.78
RPL40BP0CH09 SEN1YLR430W 6696 nt3.93□□□□□ -1.78
RPL40BP0CH09 YER077CYER077C 2067 nt3.93□□□□□ -1.78
RPL40BP0CH09 AFT1YGL071W 2073 nt3.93□□□□□ -1.78
RPL40BP0CH09 CAF16YFL028C 870 nt3.93□□□□□ -1.78
RPL40BP0CH09 YAL047W-AYAL047W-A 330 nt3.93□□□□□ -1.78
RPL40BP0CH09 ISA1YLL027W 753 nt3.93□□□□□ -1.78
RPL40BP0CH09 FAA3YIL009W 2085 nt3.93□□□□□ -1.78
RPL40BP0CH09 RTT109YLL002W 1311 nt3.93□□□□□ -1.78
RPL40BP0CH09 TRM11YOL124C 1302 nt3.93□□□□□ -1.78
RPL40BP0CH09 PER1YCR044C 1074 nt3.92□□□□□ -1.78
RPL40BP0CH09 snR7-SsnR7-S 179 nt3.92□□□□□ -1.78
RPL40BP0CH09 LSB1YGR136W 726 nt3.92□□□□□ -1.78
RPL40BP0CH09 DCD1YHR144C 939 nt3.92□□□□□ -1.78
RPL40BP0CH09 FBP1YLR377C 1047 nt3.92□□□□□ -1.78
RPL40BP0CH09 RPL19BYBL027W 570 nt3.92□□□□□ -1.78
RPL40BP0CH09 TOM7YNL070W 183 nt3.92□□□□□ -1.78
RPL40BP0CH09 GVP36YIL041W 981 nt3.91□□□□□ -1.78
RPL40BP0CH09 YKL162C-AYKL162C-A 153 nt3.91□□□□□ -1.78
RPL40BP0CH09 HST2YPL015C 1074 nt3.91□□□□□ -1.78
RPL40BP0CH09 HOYDL227C 1761 nt3.91□□□□□ -1.78
RPL40BP0CH09 ZPR1YGR211W 1461 nt3.91□□□□□ -1.78
RPL40BP0CH09 TIF4632YGL049C 2745 nt3.91□□□□□ -1.78
RPL40BP0CH09 PMC1YGL006W 3522 nt3.91□□□□□ -1.78
RPL40BP0CH09 YOL075CYOL075C 3885 nt3.91□□□□□ -1.78
RPL40BP0CH09 CYM1YDR430C 2970 nt3.9□□□□□ -1.78
RPL40BP0CH09 NUG1YER006W 1563 nt3.9□□□□□ -1.78
RPL40BP0CH09 SKP2YNL311C 2292 nt3.9□□□□□ -1.79
RPL40BP0CH09 UPS3YDR185C 540 nt3.9□□□□□ -1.79
RPL40BP0CH09 LSO1YJR005C-A 282 nt3.9□□□□□ -1.79
RPL40BP0CH09 TDA5YLR426W 981 nt3.9□□□□□ -1.79
RPL40BP0CH09 ASI2YNL159C 870 nt3.9□□□□□ -1.79
RPL40BP0CH09 UBP10YNL186W 2379 nt3.9□□□□□ -1.79
RPL40BP0CH09 YOL153CYOL153C 1746 nt3.9□□□□□ -1.79
RPL40BP0CH09 TCB3YML072C 4638 nt3.89□□□□□ -1.79
RPL40BP0CH09 YGR016WYGR016W 573 nt3.89□□□□□ -1.79
RPL40BP0CH09 IRC9YJL142C 393 nt3.89□□□□□ -1.79
RPL40BP0CH09 MRT4YKL009W 711 nt3.89□□□□□ -1.79
RPL40BP0CH09 EOS1YNL080C 1101 nt3.89□□□□□ -1.79
RPL40BP0CH09 YPK9YOR291W 4419 nt3.89□□□□□ -1.79
RPL40BP0CH09 JHD2YJR119C 2187 nt3.89□□□□□ -1.79
RPL40BP0CH09 PUB1YNL016W 1362 nt3.89□□□□□ -1.79
RPL40BP0CH09 JIP5YPR169W 1479 nt3.88□□□□□ -1.79
RPL40BP0CH09 RMD1YDL001W 1293 nt3.88□□□□□ -1.79
RPL40BP0CH09 URA3YEL021W 804 nt3.88□□□□□ -1.79
RPL40BP0CH09 EFB1YAL003W 621 nt3.88□□□□□ -1.79
RPL40BP0CH09 RSC58YLR033W 1509 nt3.88□□□□□ -1.79
RPL40BP0CH09 MTH1YDR277C 1302 nt3.88□□□□□ -1.79
RPL40BP0CH09 PEX30YLR324W 1572 nt3.88□□□□□ -1.79
RPL40BP0CH09 TSL1YML100W 3297 nt3.88□□□□□ -1.79
RPL40BP0CH09 GDE1YPL110C 3672 nt3.88□□□□□ -1.79
RPL40BP0CH09 CDC15YAR019C 2925 nt3.88□□□□□ -1.79
RPL40BP0CH09 CAB3YKL088W 1716 nt3.87□□□□□ -1.79
RPL40BP0CH09 KCH1YJR054W 1494 nt3.87□□□□□ -1.79
RPL40BP0CH09 FMP32YFL046W 624 nt3.87□□□□□ -1.79
RPL40BP0CH09 IRC25YLR021W 540 nt3.87□□□□□ -1.79
RPL40BP0CH09 CSR1YLR380W 1227 nt3.87□□□□□ -1.79
RPL40BP0CH09 GLO4YOR040W 858 nt3.87□□□□□ -1.79
RPL40BP0CH09 MSC2YDR205W 2175 nt3.87□□□□□ -1.79
RPL40BP0CH09 GAS3YMR215W 1575 nt3.86□□□□□ -1.79
RPL40BP0CH09 AAD3YCR107W 1092 nt3.86□□□□□ -1.79
RPL40BP0CH09 YDL071CYDL071C 375 nt3.86□□□□□ -1.79
RPL40BP0CH09 BCP1YDR361C 852 nt3.86□□□□□ -1.79
RPL40BP0CH09 RNA15YGL044C 891 nt3.86□□□□□ -1.79
RPL40BP0CH09 LCL2YLR104W 396 nt3.86□□□□□ -1.79
RPL40BP0CH09 YPL025CYPL025C 558 nt3.86□□□□□ -1.79
RPL40BP0CH09 CDC48YDL126C 2508 nt3.86□□□□□ -1.79
RPL40BP0CH09 SWC3YAL011W 1878 nt3.86□□□□□ -1.79
RPL40BP0CH09 YMR221CYMR221C 1515 nt3.85□□□□□ -1.79
RPL40BP0CH09 PRE4YFR050C 801 nt3.85□□□□□ -1.79
RPL40BP0CH09 DAM1YGR113W 1032 nt3.85□□□□□ -1.79
RPL40BP0CH09 SPC97YHR172W 2472 nt3.85□□□□□ -1.79
RPL40BP0CH09 IMD2YHR216W 1572 nt3.85□□□□□ -1.79
RPL40BP0CH09 MSE1YOL033W 1611 nt3.84□□□□□ -1.79
RPL40BP0CH09 ATH1YPR026W 3636 nt3.84□□□□□ -1.79
RPL40BP0CH09 YGL041W-AYGL041W-A 465 nt3.84□□□□□ -1.79
RPL40BP0CH09 YKR073CYKR073C 321 nt3.84□□□□□ -1.79
RPL40BP0CH09 YAL064W-BYAL064W-B 381 nt3.84□□□□□ -1.79
RPL40BP0CH09 YAR030CYAR030C 342 nt3.84□□□□□ -1.79
RPL40BP0CH09 SVF1YDR346C 1446 nt3.84□□□□□ -1.79
RPL40BP0CH09 STP4YDL048C 1473 nt3.84□□□□□ -1.8
RPL40BP0CH09 RPG1YBR079C 2895 nt3.83□□□□□ -1.8
RPL40BP0CH09 PDE1YGL248W 1110 nt3.83□□□□□ -1.8
RPL40BP0CH09 YKL107WYKL107W 930 nt3.83□□□□□ -1.8
RPL40BP0CH09 NTR2YKR022C 969 nt3.83□□□□□ -1.8
RPL40BP0CH09 JLP1YLL057C 1239 nt3.83□□□□□ -1.8
RPL40BP0CH09 SPO19YPL130W 672 nt3.83□□□□□ -1.8
RPL40BP0CH09 SUA7YPR086W 1038 nt3.83□□□□□ -1.8
RPL40BP0CH09 CTR1YPR124W 1221 nt3.83□□□□□ -1.8
RPL40BP0CH09 YIL001WYIL001W 1542 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms