Protein–RNA interactions for Protein: P09871

C1S, Complement C1s subcomponent, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1SP09871 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.48■■□□□ 1.19
C1SP09871 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.48■■□□□ 1.19
C1SP09871 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.48■■□□□ 1.19
C1SP09871 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
C1SP09871 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
C1SP09871 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
C1SP09871 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
C1SP09871 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
C1SP09871 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.47■■□□□ 1.19
C1SP09871 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.47■■□□□ 1.19
C1SP09871 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.47■■□□□ 1.19
C1SP09871 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
C1SP09871 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
C1SP09871 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
C1SP09871 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
C1SP09871 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.46■■□□□ 1.19
C1SP09871 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
C1SP09871 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
C1SP09871 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
C1SP09871 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
C1SP09871 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.45■■□□□ 1.18
C1SP09871 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 MIR939-201ENST00000401314 82 ntBASIC22.45■■□□□ 1.18
C1SP09871 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
C1SP09871 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.45■■□□□ 1.18
C1SP09871 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.45■■□□□ 1.18
C1SP09871 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
C1SP09871 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.44■■□□□ 1.18
C1SP09871 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.44■■□□□ 1.18
C1SP09871 AF213884.3-201ENST00000563833 479 ntBASIC22.44■■□□□ 1.18
C1SP09871 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.44■■□□□ 1.18
C1SP09871 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
C1SP09871 MIR6821-201ENST00000617625 74 ntBASIC22.44■■□□□ 1.18
C1SP09871 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
C1SP09871 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
C1SP09871 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
C1SP09871 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
C1SP09871 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
C1SP09871 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.43■■□□□ 1.18
C1SP09871 AC091305.1-201ENST00000479476 895 ntBASIC22.43■■□□□ 1.18
C1SP09871 AC099791.2-201ENST00000605725 427 ntBASIC22.43■■□□□ 1.18
C1SP09871 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.43■■□□□ 1.18
C1SP09871 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
C1SP09871 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
C1SP09871 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
C1SP09871 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
C1SP09871 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.42■■□□□ 1.18
C1SP09871 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.42■■□□□ 1.18
C1SP09871 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.42■■□□□ 1.18
C1SP09871 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C1SP09871 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.42■■□□□ 1.18
C1SP09871 AC079630.1-202ENST00000618127 1840 ntBASIC22.42■■□□□ 1.18
C1SP09871 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.42■■□□□ 1.18
C1SP09871 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
C1SP09871 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.41■■□□□ 1.18
C1SP09871 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.41■■□□□ 1.18
C1SP09871 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.41■■□□□ 1.18
C1SP09871 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
C1SP09871 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.41■■□□□ 1.18
C1SP09871 AC006455.2-201ENST00000429931 906 ntBASIC22.41■■□□□ 1.18
C1SP09871 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
C1SP09871 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
C1SP09871 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C1SP09871 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C1SP09871 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
C1SP09871 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
C1SP09871 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.4■■□□□ 1.18
C1SP09871 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
C1SP09871 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.4■■□□□ 1.18
C1SP09871 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.4■■□□□ 1.18
C1SP09871 SYT6-210ENST00000641643 1587 ntBASIC22.4■■□□□ 1.18
C1SP09871 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
C1SP09871 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.39■■□□□ 1.18
C1SP09871 AC144652.1-201ENST00000609974 1624 ntBASIC22.39■■□□□ 1.18
C1SP09871 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
C1SP09871 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
C1SP09871 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
C1SP09871 AC097381.1-201ENST00000429019 1296 ntBASIC22.39■■□□□ 1.17
C1SP09871 AP001330.3-201ENST00000520123 633 ntBASIC22.39■■□□□ 1.17
C1SP09871 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.39■■□□□ 1.17
C1SP09871 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
C1SP09871 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
C1SP09871 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms