Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.31■□□□□ 0.68
SOD3P08294 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.31■□□□□ 0.68
SOD3P08294 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.31■□□□□ 0.68
SOD3P08294 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.31■□□□□ 0.68
SOD3P08294 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.31■□□□□ 0.68
SOD3P08294 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOD3P08294 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SOD3P08294 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.3■□□□□ 0.68
SOD3P08294 AC012676.1-201ENST00000574705 1949 ntBASIC19.3■□□□□ 0.68
SOD3P08294 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.3■□□□□ 0.68
SOD3P08294 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.3■□□□□ 0.68
SOD3P08294 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.3■□□□□ 0.68
SOD3P08294 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 MIR6821-201ENST00000617625 74 ntBASIC19.3■□□□□ 0.68
SOD3P08294 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.3■□□□□ 0.68
SOD3P08294 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 AC022211.4-201ENST00000625094 2161 ntBASIC19.3■□□□□ 0.68
SOD3P08294 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SOD3P08294 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.29■□□□□ 0.68
SOD3P08294 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.29■□□□□ 0.68
SOD3P08294 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.29■□□□□ 0.68
SOD3P08294 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.29■□□□□ 0.68
SOD3P08294 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SOD3P08294 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SOD3P08294 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SOD3P08294 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SOD3P08294 IRS3P-201ENST00000223076 1006 ntBASIC19.28■□□□□ 0.68
SOD3P08294 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SOD3P08294 AC097381.1-201ENST00000429019 1296 ntBASIC19.28■□□□□ 0.68
SOD3P08294 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SOD3P08294 AC104564.3-201ENST00000582367 638 ntBASIC19.28■□□□□ 0.68
SOD3P08294 AC233992.3-201ENST00000607491 485 ntBASIC19.28■□□□□ 0.68
SOD3P08294 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SOD3P08294 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SOD3P08294 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD3P08294 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD3P08294 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SOD3P08294 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SOD3P08294 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD3P08294 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.27■□□□□ 0.68
SOD3P08294 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
SOD3P08294 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD3P08294 AC087623.3-201ENST00000607047 1098 ntBASIC19.27■□□□□ 0.68
SOD3P08294 pRNA.6-201ENST00000610482 90 ntBASIC19.27■□□□□ 0.68
SOD3P08294 pRNA.5-201ENST00000612139 90 ntBASIC19.27■□□□□ 0.68
SOD3P08294 pRNA.11-201ENST00000618423 90 ntBASIC19.27■□□□□ 0.68
SOD3P08294 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.27■□□□□ 0.68
SOD3P08294 pRNA.13-201ENST00000619112 90 ntBASIC19.27■□□□□ 0.68
SOD3P08294 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SOD3P08294 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD3P08294 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SOD3P08294 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD3P08294 BX842568.3-201ENST00000418104 571 ntBASIC19.26■□□□□ 0.67
SOD3P08294 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.26■□□□□ 0.67
SOD3P08294 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOD3P08294 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SOD3P08294 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SOD3P08294 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.25■□□□□ 0.67
SOD3P08294 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD3P08294 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SOD3P08294 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.24■□□□□ 0.67
SOD3P08294 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.24■□□□□ 0.67
SOD3P08294 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.24■□□□□ 0.67
SOD3P08294 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD3P08294 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.24■□□□□ 0.67
SOD3P08294 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms