Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.98■■□□□ 1.43
RB1P06400 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RB1P06400 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.98■■□□□ 1.43
RB1P06400 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RB1P06400 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RB1P06400 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RB1P06400 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.97■■□□□ 1.43
RB1P06400 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RB1P06400 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.97■■□□□ 1.43
RB1P06400 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.97■■□□□ 1.43
RB1P06400 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.97■■□□□ 1.43
RB1P06400 AL121749.1-202ENST00000609313 2153 ntBASIC23.97■■□□□ 1.43
RB1P06400 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.97■■□□□ 1.43
RB1P06400 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.96■■□□□ 1.43
RB1P06400 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 FP325331.1-202ENST00000623531 1380 ntBASIC23.96■■□□□ 1.43
RB1P06400 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.96■■□□□ 1.43
RB1P06400 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.96■■□□□ 1.43
RB1P06400 AC010525.1-201ENST00000585559 441 ntBASIC23.96■■□□□ 1.43
RB1P06400 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RB1P06400 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
RB1P06400 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 HLA-L-209ENST00000420110 1011 ntBASIC23.95■■□□□ 1.42
RB1P06400 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.95■■□□□ 1.42
RB1P06400 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
RB1P06400 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
RB1P06400 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 AC091060.1-201ENST00000623524 1766 ntBASIC23.94■■□□□ 1.42
RB1P06400 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.94■■□□□ 1.42
RB1P06400 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
RB1P06400 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.94■■□□□ 1.42
RB1P06400 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.94■■□□□ 1.42
RB1P06400 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RB1P06400 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RB1P06400 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RB1P06400 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
RB1P06400 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.93■■□□□ 1.42
RB1P06400 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RB1P06400 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.93■■□□□ 1.42
RB1P06400 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RB1P06400 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RB1P06400 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RB1P06400 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.92■■□□□ 1.42
RB1P06400 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RB1P06400 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RB1P06400 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RB1P06400 DUX4L4-201ENST00000566884 1269 ntBASIC23.92■■□□□ 1.42
RB1P06400 AC080038.1-201ENST00000611274 1154 ntBASIC23.92■■□□□ 1.42
RB1P06400 AC105233.4-201ENST00000642045 216 ntBASIC23.92■■□□□ 1.42
RB1P06400 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.92■■□□□ 1.42
RB1P06400 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.92■■□□□ 1.42
RB1P06400 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RB1P06400 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RB1P06400 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RB1P06400 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
RB1P06400 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.91■■□□□ 1.42
RB1P06400 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RB1P06400 AC006015.1-201ENST00000429970 570 ntBASIC23.91■■□□□ 1.42
RB1P06400 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.91■■□□□ 1.42
RB1P06400 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.91■■□□□ 1.42
RB1P06400 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.91■■□□□ 1.42
RB1P06400 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RB1P06400 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.91■■□□□ 1.42
RB1P06400 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.91■■□□□ 1.42
RB1P06400 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.9■■□□□ 1.42
RB1P06400 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RB1P06400 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.9■■□□□ 1.42
RB1P06400 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.9■■□□□ 1.42
RB1P06400 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.9■■□□□ 1.42
RB1P06400 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.9■■□□□ 1.42
RB1P06400 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.9■■□□□ 1.42
RB1P06400 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RB1P06400 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.9■■□□□ 1.42
RB1P06400 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.89■■□□□ 1.42
RB1P06400 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
RB1P06400 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
RB1P06400 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.89■■□□□ 1.41
RB1P06400 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
RB1P06400 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
RB1P06400 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RB1P06400 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms