Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGN1P05114 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
HMGN1P05114 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 AC137767.1-201ENST00000602918 1920 ntBASIC20.24■□□□□ 0.83
HMGN1P05114 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.24■□□□□ 0.83
HMGN1P05114 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.24■□□□□ 0.83
HMGN1P05114 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.24■□□□□ 0.83
HMGN1P05114 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HMGN1P05114 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
HMGN1P05114 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HMGN1P05114 KRT18P60-201ENST00000312876 1297 ntBASIC20.23■□□□□ 0.83
HMGN1P05114 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGN1P05114 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.23■□□□□ 0.83
HMGN1P05114 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.23■□□□□ 0.83
HMGN1P05114 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGN1P05114 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGN1P05114 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.22■□□□□ 0.83
HMGN1P05114 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HMGN1P05114 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
HMGN1P05114 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
HMGN1P05114 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN1P05114 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HMGN1P05114 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN1P05114 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN1P05114 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN1P05114 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
HMGN1P05114 AC120024.1-201ENST00000562672 995 ntBASIC20.21■□□□□ 0.83
HMGN1P05114 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HMGN1P05114 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HMGN1P05114 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
HMGN1P05114 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.21■□□□□ 0.83
HMGN1P05114 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGN1P05114 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
HMGN1P05114 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.2■□□□□ 0.82
HMGN1P05114 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.2■□□□□ 0.82
HMGN1P05114 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HMGN1P05114 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HMGN1P05114 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGN1P05114 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.19■□□□□ 0.82
HMGN1P05114 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
HMGN1P05114 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.19■□□□□ 0.82
HMGN1P05114 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
HMGN1P05114 AC004448.1-201ENST00000458332 883 ntBASIC20.19■□□□□ 0.82
HMGN1P05114 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HMGN1P05114 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HMGN1P05114 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.18■□□□□ 0.82
HMGN1P05114 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HMGN1P05114 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HMGN1P05114 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 AF131216.4-201ENST00000638924 1588 ntBASIC20.17■□□□□ 0.82
HMGN1P05114 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HMGN1P05114 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 KRT18P24-201ENST00000344739 1156 ntBASIC20.17■□□□□ 0.82
HMGN1P05114 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HMGN1P05114 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.17■□□□□ 0.82
HMGN1P05114 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.17■□□□□ 0.82
HMGN1P05114 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HMGN1P05114 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HMGN1P05114 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HMGN1P05114 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HMGN1P05114 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms