Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.53■■□□□ 1.68
HMGCRP04035 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCRP04035 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCRP04035 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.53■■□□□ 1.68
HMGCRP04035 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCRP04035 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
HMGCRP04035 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
HMGCRP04035 AC133637.1-201ENST00000624115 1537 ntBASIC25.53■■□□□ 1.68
HMGCRP04035 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCRP04035 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.52■■□□□ 1.68
HMGCRP04035 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCRP04035 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCRP04035 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
HMGCRP04035 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCRP04035 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HMGCRP04035 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
HMGCRP04035 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCRP04035 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
HMGCRP04035 AC080038.1-201ENST00000611274 1154 ntBASIC25.51■■□□□ 1.67
HMGCRP04035 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCRP04035 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCRP04035 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
HMGCRP04035 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCRP04035 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCRP04035 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCRP04035 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.5■■□□□ 1.67
HMGCRP04035 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HMGCRP04035 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC25.5■■□□□ 1.67
HMGCRP04035 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCRP04035 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
HMGCRP04035 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.49■■□□□ 1.67
HMGCRP04035 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.49■■□□□ 1.67
HMGCRP04035 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCRP04035 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCRP04035 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
HMGCRP04035 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.48■■□□□ 1.67
HMGCRP04035 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.48■■□□□ 1.67
HMGCRP04035 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.48■■□□□ 1.67
HMGCRP04035 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC25.48■■□□□ 1.67
HMGCRP04035 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCRP04035 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
HMGCRP04035 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
HMGCRP04035 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.48■■□□□ 1.67
HMGCRP04035 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.48■■□□□ 1.67
HMGCRP04035 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.47■■□□□ 1.67
HMGCRP04035 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC25.47■■□□□ 1.67
HMGCRP04035 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
HMGCRP04035 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
HMGCRP04035 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
HMGCRP04035 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.47■■□□□ 1.67
HMGCRP04035 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.47■■□□□ 1.67
HMGCRP04035 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.47■■□□□ 1.67
HMGCRP04035 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HMGCRP04035 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.47■■□□□ 1.67
HMGCRP04035 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
HMGCRP04035 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.46■■□□□ 1.67
HMGCRP04035 AC006015.1-201ENST00000429970 570 ntBASIC25.46■■□□□ 1.67
HMGCRP04035 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 AC010525.1-201ENST00000585559 441 ntBASIC25.46■■□□□ 1.67
HMGCRP04035 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HMGCRP04035 ALDH1A3-203ENST00000557963 1670 ntBASIC25.45■■□□□ 1.67
HMGCRP04035 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
HMGCRP04035 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
HMGCRP04035 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCRP04035 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCRP04035 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCRP04035 OR2I1P-207ENST00000453522 948 ntBASIC25.45■■□□□ 1.66
HMGCRP04035 RAP2CP1-201ENST00000605103 478 ntBASIC25.45■■□□□ 1.66
HMGCRP04035 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
HMGCRP04035 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.44■■□□□ 1.66
HMGCRP04035 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.44■■□□□ 1.66
HMGCRP04035 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCRP04035 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.44■■□□□ 1.66
HMGCRP04035 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.44■■□□□ 1.66
HMGCRP04035 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCRP04035 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.44■■□□□ 1.66
HMGCRP04035 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCRP04035 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
HMGCRP04035 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
HMGCRP04035 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.43■■□□□ 1.66
HMGCRP04035 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC25.43■■□□□ 1.66
HMGCRP04035 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.43■■□□□ 1.66
HMGCRP04035 AL499627.2-201ENST00000606283 725 ntBASIC25.43■■□□□ 1.66
HMGCRP04035 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.43■■□□□ 1.66
HMGCRP04035 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
HMGCRP04035 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.42■■□□□ 1.66
HMGCRP04035 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HMGCRP04035 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
HMGCRP04035 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.42■■□□□ 1.66
HMGCRP04035 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.42■■□□□ 1.66
HMGCRP04035 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.42■■□□□ 1.66
HMGCRP04035 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.42■■□□□ 1.66
HMGCRP04035 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
HMGCRP04035 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
HMGCRP04035 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms