Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TNFP01375 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.99■■□□□ 1.11
TNFP01375 DUX4L4-201ENST00000566884 1269 ntBASIC21.99■■□□□ 1.11
TNFP01375 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TNFP01375 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.99■■□□□ 1.11
TNFP01375 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TNFP01375 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
TNFP01375 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.99■■□□□ 1.11
TNFP01375 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TNFP01375 AL139125.2-201ENST00000623134 1869 ntBASIC21.98■■□□□ 1.11
TNFP01375 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.98■■□□□ 1.11
TNFP01375 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFP01375 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFP01375 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFP01375 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.98■■□□□ 1.11
TNFP01375 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.98■■□□□ 1.11
TNFP01375 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFP01375 AC144652.1-201ENST00000609974 1624 ntBASIC21.98■■□□□ 1.11
TNFP01375 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TNFP01375 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TNFP01375 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFP01375 AC133637.1-201ENST00000624115 1537 ntBASIC21.97■■□□□ 1.11
TNFP01375 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFP01375 IRS3P-201ENST00000223076 1006 ntBASIC21.97■■□□□ 1.11
TNFP01375 AC126544.1-201ENST00000580842 1059 ntBASIC21.97■■□□□ 1.11
TNFP01375 AL499627.2-201ENST00000606283 725 ntBASIC21.97■■□□□ 1.11
TNFP01375 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TNFP01375 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.97■■□□□ 1.11
TNFP01375 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFP01375 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFP01375 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TNFP01375 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFP01375 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFP01375 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.96■■□□□ 1.11
TNFP01375 LINC01529-204ENST00000636474 1715 ntBASIC21.96■■□□□ 1.11
TNFP01375 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TNFP01375 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.95■■□□□ 1.1
TNFP01375 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFP01375 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFP01375 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TNFP01375 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TNFP01375 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.95■■□□□ 1.1
TNFP01375 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.94■■□□□ 1.1
TNFP01375 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFP01375 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.94■■□□□ 1.1
TNFP01375 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.94■■□□□ 1.1
TNFP01375 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.94■■□□□ 1.1
TNFP01375 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TNFP01375 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TNFP01375 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFP01375 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TNFP01375 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.93■■□□□ 1.1
TNFP01375 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
TNFP01375 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TNFP01375 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TNFP01375 SLC47A1P1-202ENST00000449666 945 ntBASIC21.93■■□□□ 1.1
TNFP01375 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TNFP01375 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.93■■□□□ 1.1
TNFP01375 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.93■■□□□ 1.1
TNFP01375 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.92■■□□□ 1.1
TNFP01375 AC026271.2-201ENST00000428091 497 ntBASIC21.92■■□□□ 1.1
TNFP01375 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 AC004812.2-201ENST00000611079 2094 ntBASIC21.92■■□□□ 1.1
TNFP01375 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TNFP01375 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.92■■□□□ 1.1
TNFP01375 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFP01375 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.91■■□□□ 1.1
TNFP01375 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFP01375 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
TNFP01375 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFP01375 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.91■■□□□ 1.1
TNFP01375 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.91■■□□□ 1.1
TNFP01375 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TNFP01375 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TNFP01375 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TNFP01375 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TNFP01375 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
TNFP01375 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TNFP01375 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.9■■□□□ 1.1
TNFP01375 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.9■■□□□ 1.1
TNFP01375 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TNFP01375 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms