Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.32■□□□□ 0.68
DHFRP00374 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
DHFRP00374 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.32■□□□□ 0.68
DHFRP00374 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.32■□□□□ 0.68
DHFRP00374 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DHFRP00374 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.31■□□□□ 0.68
DHFRP00374 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.31■□□□□ 0.68
DHFRP00374 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DHFRP00374 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.31■□□□□ 0.68
DHFRP00374 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.31■□□□□ 0.68
DHFRP00374 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DHFRP00374 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.3■□□□□ 0.68
DHFRP00374 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
DHFRP00374 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DHFRP00374 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DHFRP00374 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DHFRP00374 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
DHFRP00374 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DHFRP00374 C11orf96-202ENST00000528572 1834 ntBASIC19.3■□□□□ 0.68
DHFRP00374 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.29■□□□□ 0.68
DHFRP00374 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.29■□□□□ 0.68
DHFRP00374 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.29■□□□□ 0.68
DHFRP00374 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DHFRP00374 AC073130.3-201ENST00000624389 2278 ntBASIC19.28■□□□□ 0.68
DHFRP00374 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
DHFRP00374 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.28■□□□□ 0.68
DHFRP00374 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
DHFRP00374 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
DHFRP00374 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
DHFRP00374 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.27■□□□□ 0.68
DHFRP00374 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.27■□□□□ 0.68
DHFRP00374 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
DHFRP00374 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.27■□□□□ 0.68
DHFRP00374 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DHFRP00374 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
DHFRP00374 AC092053.2-201ENST00000640557 1818 ntBASIC19.27■□□□□ 0.68
DHFRP00374 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DHFRP00374 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
DHFRP00374 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.27■□□□□ 0.67
DHFRP00374 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
DHFRP00374 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.27■□□□□ 0.67
DHFRP00374 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DHFRP00374 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
DHFRP00374 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
DHFRP00374 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
DHFRP00374 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DHFRP00374 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.25■□□□□ 0.67
DHFRP00374 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.25■□□□□ 0.67
DHFRP00374 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 MIR639-201ENST00000384974 98 ntBASIC19.25■□□□□ 0.67
DHFRP00374 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DHFRP00374 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.25■□□□□ 0.67
DHFRP00374 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms