Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.02■□□□□ 0.96
CLPTM1O96005 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.02■□□□□ 0.96
CLPTM1O96005 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1O96005 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.01■□□□□ 0.95
CLPTM1O96005 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1O96005 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CLPTM1O96005 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1O96005 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.01■□□□□ 0.95
CLPTM1O96005 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.01■□□□□ 0.95
CLPTM1O96005 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1O96005 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.01■□□□□ 0.95
CLPTM1O96005 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLPTM1O96005 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.01■□□□□ 0.95
CLPTM1O96005 RNF165-205ENST00000588679 2904 ntBASIC21.01■□□□□ 0.95
CLPTM1O96005 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CLPTM1O96005 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CLPTM1O96005 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLPTM1O96005 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLPTM1O96005 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21■□□□□ 0.95
CLPTM1O96005 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLPTM1O96005 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLPTM1O96005 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLPTM1O96005 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CLPTM1O96005 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLPTM1O96005 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.99■□□□□ 0.95
CLPTM1O96005 U85056.1-201ENST00000616429 682 ntBASIC20.99■□□□□ 0.95
CLPTM1O96005 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLPTM1O96005 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLPTM1O96005 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLPTM1O96005 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLPTM1O96005 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLPTM1O96005 RP9P-202ENST00000450133 1212 ntBASIC20.98■□□□□ 0.95
CLPTM1O96005 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1O96005 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.98■□□□□ 0.95
CLPTM1O96005 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1O96005 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1O96005 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1O96005 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLPTM1O96005 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 AC093536.1-201ENST00000569153 554 ntBASIC20.97■□□□□ 0.95
CLPTM1O96005 MIR3960-201ENST00000583311 91 ntBASIC20.97■□□□□ 0.95
CLPTM1O96005 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLPTM1O96005 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLPTM1O96005 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPTM1O96005 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CLPTM1O96005 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
CLPTM1O96005 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.97■□□□□ 0.95
CLPTM1O96005 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLPTM1O96005 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPTM1O96005 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.96■□□□□ 0.95
CLPTM1O96005 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLPTM1O96005 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.96■□□□□ 0.95
CLPTM1O96005 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLPTM1O96005 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CLPTM1O96005 FBXW4P1-201ENST00000426721 2239 ntBASIC20.96■□□□□ 0.95
CLPTM1O96005 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.95
CLPTM1O96005 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLPTM1O96005 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.95■□□□□ 0.94
CLPTM1O96005 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLPTM1O96005 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.95■□□□□ 0.94
CLPTM1O96005 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.95■□□□□ 0.94
CLPTM1O96005 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLPTM1O96005 NTF6A-201ENST00000591175 560 ntBASIC20.95■□□□□ 0.94
CLPTM1O96005 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLPTM1O96005 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms