Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX4O95219 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNX4O95219 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX4O95219 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX4O95219 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX4O95219 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX4O95219 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX4O95219 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.89■□□□□ 0.93
SNX4O95219 AC008406.3-201ENST00000620001 1374 ntBASIC20.88■□□□□ 0.93
SNX4O95219 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX4O95219 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX4O95219 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX4O95219 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX4O95219 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX4O95219 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX4O95219 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.87■□□□□ 0.93
SNX4O95219 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SNX4O95219 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.87■□□□□ 0.93
SNX4O95219 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX4O95219 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SNX4O95219 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX4O95219 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX4O95219 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SNX4O95219 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.86■□□□□ 0.93
SNX4O95219 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.86■□□□□ 0.93
SNX4O95219 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.86■□□□□ 0.93
SNX4O95219 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX4O95219 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SNX4O95219 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX4O95219 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SNX4O95219 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNX4O95219 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.85■□□□□ 0.93
SNX4O95219 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SNX4O95219 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.85■□□□□ 0.93
SNX4O95219 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX4O95219 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
SNX4O95219 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNX4O95219 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX4O95219 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX4O95219 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX4O95219 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.84■□□□□ 0.93
SNX4O95219 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SNX4O95219 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SNX4O95219 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SNX4O95219 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SNX4O95219 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
SNX4O95219 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX4O95219 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SNX4O95219 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SNX4O95219 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SNX4O95219 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX4O95219 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX4O95219 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SNX4O95219 AL024507.2-201ENST00000606070 2574 ntBASIC20.83■□□□□ 0.93
SNX4O95219 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.83■□□□□ 0.93
SNX4O95219 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SNX4O95219 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.83■□□□□ 0.92
SNX4O95219 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SNX4O95219 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SNX4O95219 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.82■□□□□ 0.92
SNX4O95219 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.82■□□□□ 0.92
SNX4O95219 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 AC131281.2-201ENST00000520478 145 ntBASIC20.82■□□□□ 0.92
SNX4O95219 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 ALDH1A3-203ENST00000557963 1670 ntBASIC20.82■□□□□ 0.92
SNX4O95219 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SNX4O95219 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SNX4O95219 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.81■□□□□ 0.92
SNX4O95219 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SNX4O95219 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 LINC00565-201ENST00000562710 2331 ntBASIC20.81■□□□□ 0.92
SNX4O95219 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX4O95219 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.81■□□□□ 0.92
SNX4O95219 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNX4O95219 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms