Protein–RNA interactions for Protein: O75569

PRKRA, Interferon-inducible double-stranded RNA-dependent protein kinase activator A, humanhuman

Known RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRAO75569 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRKRAO75569 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.2■□□□□ 0.98
PRKRAO75569 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PRKRAO75569 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PRKRAO75569 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.2■□□□□ 0.98
PRKRAO75569 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRKRAO75569 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.19■□□□□ 0.98
PRKRAO75569 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.19■□□□□ 0.98
PRKRAO75569 DUSP8P3-201ENST00000399571 1760 ntBASIC21.19■□□□□ 0.98
PRKRAO75569 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.19■□□□□ 0.98
PRKRAO75569 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.19■□□□□ 0.98
PRKRAO75569 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRKRAO75569 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.19■□□□□ 0.98
PRKRAO75569 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.19■□□□□ 0.98
PRKRAO75569 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PRKRAO75569 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PRKRAO75569 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PRKRAO75569 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.18■□□□□ 0.98
PRKRAO75569 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRKRAO75569 AL353803.4-201ENST00000565882 1934 ntBASIC21.17■□□□□ 0.98
PRKRAO75569 AC133561.1-201ENST00000568600 2415 ntBASIC21.17■□□□□ 0.98
PRKRAO75569 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRKRAO75569 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRKRAO75569 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRKRAO75569 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.17■□□□□ 0.98
PRKRAO75569 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRKRAO75569 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
PRKRAO75569 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRKRAO75569 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.16■□□□□ 0.98
PRKRAO75569 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PRKRAO75569 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.16■□□□□ 0.98
PRKRAO75569 MIR3621-201ENST00000580529 85 ntBASIC21.16■□□□□ 0.98
PRKRAO75569 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.16■□□□□ 0.98
PRKRAO75569 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRKRAO75569 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
PRKRAO75569 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
PRKRAO75569 AC144652.1-201ENST00000609974 1624 ntBASIC21.15■□□□□ 0.98
PRKRAO75569 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.15■□□□□ 0.98
PRKRAO75569 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.15■□□□□ 0.98
PRKRAO75569 AL356740.2-201ENST00000601559 647 ntBASIC21.15■□□□□ 0.98
PRKRAO75569 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PRKRAO75569 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRKRAO75569 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.15■□□□□ 0.98
PRKRAO75569 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.14■□□□□ 0.98
PRKRAO75569 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRKRAO75569 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
PRKRAO75569 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRKRAO75569 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRKRAO75569 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKRAO75569 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKRAO75569 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKRAO75569 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKRAO75569 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKRAO75569 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.14■□□□□ 0.97
PRKRAO75569 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.14■□□□□ 0.97
PRKRAO75569 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.14■□□□□ 0.97
PRKRAO75569 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.14■□□□□ 0.97
PRKRAO75569 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.14■□□□□ 0.97
PRKRAO75569 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKRAO75569 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.14■□□□□ 0.97
PRKRAO75569 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRKRAO75569 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PRKRAO75569 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PRKRAO75569 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.13■□□□□ 0.97
PRKRAO75569 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
PRKRAO75569 C17orf82-201ENST00000623772 1530 ntBASIC21.13■□□□□ 0.97
PRKRAO75569 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRKRAO75569 AC068473.5-201ENST00000616428 2072 ntBASIC21.13■□□□□ 0.97
PRKRAO75569 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.12■□□□□ 0.97
PRKRAO75569 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.12■□□□□ 0.97
PRKRAO75569 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.12■□□□□ 0.97
PRKRAO75569 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRKRAO75569 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
PRKRAO75569 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms