Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CXCL13O43927 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.08■□□□□ 0.8
CXCL13O43927 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CXCL13O43927 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 AL136162.1-201ENST00000607711 1078 ntBASIC20.07■□□□□ 0.8
CXCL13O43927 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.07■□□□□ 0.8
CXCL13O43927 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.07■□□□□ 0.8
CXCL13O43927 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CXCL13O43927 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.06■□□□□ 0.8
CXCL13O43927 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
CXCL13O43927 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
CXCL13O43927 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.06■□□□□ 0.8
CXCL13O43927 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CXCL13O43927 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CXCL13O43927 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCL13O43927 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCL13O43927 SERBP1P1-201ENST00000396021 1160 ntBASIC20.05■□□□□ 0.8
CXCL13O43927 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.05■□□□□ 0.8
CXCL13O43927 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.05■□□□□ 0.8
CXCL13O43927 PBX2P1-201ENST00000493219 1291 ntBASIC20.05■□□□□ 0.8
CXCL13O43927 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CXCL13O43927 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCL13O43927 FP325331.1-202ENST00000623531 1380 ntBASIC20.05■□□□□ 0.8
CXCL13O43927 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CXCL13O43927 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL13O43927 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CXCL13O43927 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CXCL13O43927 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CXCL13O43927 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CXCL13O43927 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CXCL13O43927 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL13O43927 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.04■□□□□ 0.8
CXCL13O43927 LINC01529-204ENST00000636474 1715 ntBASIC20.04■□□□□ 0.8
CXCL13O43927 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CXCL13O43927 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.03■□□□□ 0.8
CXCL13O43927 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL13O43927 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.03■□□□□ 0.8
CXCL13O43927 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL13O43927 AC024257.2-201ENST00000549699 147 ntBASIC20.03■□□□□ 0.8
CXCL13O43927 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL13O43927 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL13O43927 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.03■□□□□ 0.8
CXCL13O43927 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CXCL13O43927 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.8
CXCL13O43927 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL13O43927 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.02■□□□□ 0.8
CXCL13O43927 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL13O43927 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.02■□□□□ 0.8
CXCL13O43927 pRNA.6-201ENST00000610482 90 ntBASIC20.02■□□□□ 0.8
CXCL13O43927 pRNA.5-201ENST00000612139 90 ntBASIC20.02■□□□□ 0.8
CXCL13O43927 pRNA.11-201ENST00000618423 90 ntBASIC20.02■□□□□ 0.8
CXCL13O43927 pRNA.13-201ENST00000619112 90 ntBASIC20.02■□□□□ 0.8
CXCL13O43927 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.02■□□□□ 0.8
CXCL13O43927 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL13O43927 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.02■□□□□ 0.8
CXCL13O43927 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CXCL13O43927 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.02■□□□□ 0.79
CXCL13O43927 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL13O43927 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL13O43927 ANOS2P-203ENST00000472227 1816 ntBASIC20.02■□□□□ 0.79
CXCL13O43927 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL13O43927 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CXCL13O43927 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL13O43927 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.01■□□□□ 0.79
CXCL13O43927 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL13O43927 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.01■□□□□ 0.79
CXCL13O43927 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 DUX4L4-201ENST00000566884 1269 ntBASIC20.01■□□□□ 0.79
CXCL13O43927 MIR3181-201ENST00000578512 73 ntBASIC20.01■□□□□ 0.79
CXCL13O43927 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.01■□□□□ 0.79
CXCL13O43927 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL13O43927 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL13O43927 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CXCL13O43927 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.01■□□□□ 0.79
CXCL13O43927 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CXCL13O43927 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20■□□□□ 0.79
CXCL13O43927 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CXCL13O43927 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms