Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXS1O43638 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
FOXS1O43638 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXS1O43638 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXS1O43638 MIR3181-201ENST00000578512 73 ntBASIC21.2■□□□□ 0.98
FOXS1O43638 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXS1O43638 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXS1O43638 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXS1O43638 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
FOXS1O43638 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
FOXS1O43638 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
FOXS1O43638 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.19■□□□□ 0.98
FOXS1O43638 AC133561.4-201ENST00000566112 224 ntBASIC21.19■□□□□ 0.98
FOXS1O43638 DUX4L4-201ENST00000566884 1269 ntBASIC21.19■□□□□ 0.98
FOXS1O43638 AL138724.1-201ENST00000606771 1088 ntBASIC21.19■□□□□ 0.98
FOXS1O43638 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXS1O43638 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXS1O43638 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXS1O43638 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXS1O43638 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXS1O43638 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
FOXS1O43638 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXS1O43638 pRNA.6-201ENST00000610482 90 ntBASIC21.18■□□□□ 0.98
FOXS1O43638 pRNA.5-201ENST00000612139 90 ntBASIC21.18■□□□□ 0.98
FOXS1O43638 pRNA.11-201ENST00000618423 90 ntBASIC21.18■□□□□ 0.98
FOXS1O43638 pRNA.13-201ENST00000619112 90 ntBASIC21.18■□□□□ 0.98
FOXS1O43638 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXS1O43638 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXS1O43638 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
FOXS1O43638 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXS1O43638 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FOXS1O43638 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXS1O43638 LINC01529-204ENST00000636474 1715 ntBASIC21.18■□□□□ 0.98
FOXS1O43638 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXS1O43638 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
FOXS1O43638 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXS1O43638 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXS1O43638 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
FOXS1O43638 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.17■□□□□ 0.98
FOXS1O43638 AC011298.3-201ENST00000615796 283 ntBASIC21.17■□□□□ 0.98
FOXS1O43638 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXS1O43638 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXS1O43638 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXS1O43638 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.17■□□□□ 0.98
FOXS1O43638 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FOXS1O43638 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXS1O43638 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXS1O43638 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
FOXS1O43638 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXS1O43638 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXS1O43638 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 AC005837.3-201ENST00000612163 286 ntBASIC21.16■□□□□ 0.98
FOXS1O43638 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXS1O43638 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
FOXS1O43638 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXS1O43638 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXS1O43638 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
FOXS1O43638 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXS1O43638 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXS1O43638 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXS1O43638 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.15■□□□□ 0.98
FOXS1O43638 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXS1O43638 AL031432.3-201ENST00000607698 485 ntBASIC21.15■□□□□ 0.98
FOXS1O43638 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXS1O43638 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXS1O43638 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXS1O43638 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXS1O43638 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.14■□□□□ 0.97
FOXS1O43638 MIR4767-201ENST00000582827 78 ntBASIC21.14■□□□□ 0.97
FOXS1O43638 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.14■□□□□ 0.97
FOXS1O43638 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXS1O43638 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXS1O43638 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXS1O43638 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.14■□□□□ 0.97
FOXS1O43638 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
FOXS1O43638 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
FOXS1O43638 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.14■□□□□ 0.97
FOXS1O43638 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXS1O43638 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXS1O43638 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXS1O43638 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.13■□□□□ 0.97
FOXS1O43638 AL499627.2-201ENST00000606283 725 ntBASIC21.13■□□□□ 0.97
FOXS1O43638 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXS1O43638 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.13■□□□□ 0.97
FOXS1O43638 ANOS2P-203ENST00000472227 1816 ntBASIC21.13■□□□□ 0.97
FOXS1O43638 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXS1O43638 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
FOXS1O43638 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXS1O43638 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FOXS1O43638 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
FOXS1O43638 EDA-201ENST00000338901 1233 ntBASIC21.12■□□□□ 0.97
FOXS1O43638 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms