Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TNRC18O15417 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNRC18O15417 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC25.02■■□□□ 1.6
TNRC18O15417 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
TNRC18O15417 AC073912.3-201ENST00000624414 853 ntBASIC25.02■■□□□ 1.6
TNRC18O15417 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TNRC18O15417 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
TNRC18O15417 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.02■■□□□ 1.6
TNRC18O15417 AC005181.1-201ENST00000604782 1256 ntBASIC25.02■■□□□ 1.6
TNRC18O15417 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.02■■□□□ 1.6
TNRC18O15417 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.01■■□□□ 1.59
TNRC18O15417 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
TNRC18O15417 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
TNRC18O15417 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TNRC18O15417 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.01■■□□□ 1.59
TNRC18O15417 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
TNRC18O15417 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TNRC18O15417 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.01■■□□□ 1.59
TNRC18O15417 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
TNRC18O15417 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC25.01■■□□□ 1.59
TNRC18O15417 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25■■□□□ 1.59
TNRC18O15417 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25■■□□□ 1.59
TNRC18O15417 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25■■□□□ 1.59
TNRC18O15417 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC25■■□□□ 1.59
TNRC18O15417 AC133041.1-202ENST00000642053 222 ntBASIC25■■□□□ 1.59
TNRC18O15417 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNRC18O15417 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNRC18O15417 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.99■■□□□ 1.59
TNRC18O15417 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
TNRC18O15417 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
TNRC18O15417 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TNRC18O15417 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.99■■□□□ 1.59
TNRC18O15417 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.99■■□□□ 1.59
TNRC18O15417 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TNRC18O15417 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.99■■□□□ 1.59
TNRC18O15417 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TNRC18O15417 KRT18P21-201ENST00000515767 1272 ntBASIC24.99■■□□□ 1.59
TNRC18O15417 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.99■■□□□ 1.59
TNRC18O15417 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC24.98■■□□□ 1.59
TNRC18O15417 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TNRC18O15417 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNRC18O15417 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TNRC18O15417 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TNRC18O15417 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.98■■□□□ 1.59
TNRC18O15417 DUX4L4-201ENST00000566884 1269 ntBASIC24.98■■□□□ 1.59
TNRC18O15417 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.98■■□□□ 1.59
TNRC18O15417 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNRC18O15417 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.97■■□□□ 1.59
TNRC18O15417 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC24.97■■□□□ 1.59
TNRC18O15417 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TNRC18O15417 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.97■■□□□ 1.59
TNRC18O15417 LINC01023-201ENST00000606054 436 ntBASIC24.97■■□□□ 1.59
TNRC18O15417 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TNRC18O15417 DUX4L16-201ENST00000555130 1264 ntBASIC24.97■■□□□ 1.59
TNRC18O15417 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
TNRC18O15417 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TNRC18O15417 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TNRC18O15417 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
TNRC18O15417 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC18O15417 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC18O15417 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC18O15417 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.96■■□□□ 1.59
TNRC18O15417 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC18O15417 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TNRC18O15417 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
TNRC18O15417 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.95■■□□□ 1.58
TNRC18O15417 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
TNRC18O15417 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.95■■□□□ 1.58
TNRC18O15417 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.95■■□□□ 1.58
TNRC18O15417 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TNRC18O15417 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.94■■□□□ 1.58
TNRC18O15417 AC231657.2-201ENST00000624556 255 ntBASIC24.94■■□□□ 1.58
TNRC18O15417 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.94■■□□□ 1.58
TNRC18O15417 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.94■■□□□ 1.58
TNRC18O15417 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TNRC18O15417 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TNRC18O15417 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.93■■□□□ 1.58
TNRC18O15417 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC18O15417 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC18O15417 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC18O15417 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC18O15417 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TNRC18O15417 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.93■■□□□ 1.58
TNRC18O15417 AC008550.1-201ENST00000511500 884 ntBASIC24.93■■□□□ 1.58
TNRC18O15417 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
TNRC18O15417 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.93■■□□□ 1.58
TNRC18O15417 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
TNRC18O15417 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.92■■□□□ 1.58
TNRC18O15417 RARRES2P4-201ENST00000514074 484 ntBASIC24.92■■□□□ 1.58
TNRC18O15417 AC006058.3-201ENST00000606217 1069 ntBASIC24.92■■□□□ 1.58
TNRC18O15417 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.92■■□□□ 1.58
TNRC18O15417 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TNRC18O15417 AF201337.1-201ENST00000520239 748 ntBASIC24.91■■□□□ 1.58
TNRC18O15417 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TNRC18O15417 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms