Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOX1O00570 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SOX1O00570 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.29■■□□□ 1.48
SOX1O00570 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SOX1O00570 AC098590.1-201ENST00000468126 897 ntBASIC24.29■■□□□ 1.48
SOX1O00570 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.29■■□□□ 1.48
SOX1O00570 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SOX1O00570 AC098934.4-201ENST00000564127 592 ntBASIC24.29■■□□□ 1.48
SOX1O00570 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
SOX1O00570 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SOX1O00570 KRT18P11-201ENST00000435214 1283 ntBASIC24.28■■□□□ 1.48
SOX1O00570 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.28■■□□□ 1.48
SOX1O00570 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.28■■□□□ 1.48
SOX1O00570 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SOX1O00570 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SOX1O00570 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.27■■□□□ 1.48
SOX1O00570 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.27■■□□□ 1.48
SOX1O00570 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.27■■□□□ 1.48
SOX1O00570 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SOX1O00570 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOX1O00570 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.26■■□□□ 1.47
SOX1O00570 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SOX1O00570 SLC29A4P1-201ENST00000398760 971 ntBASIC24.26■■□□□ 1.47
SOX1O00570 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.26■■□□□ 1.47
SOX1O00570 MFSD11-216ENST00000590393 1141 ntBASIC24.26■■□□□ 1.47
SOX1O00570 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOX1O00570 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOX1O00570 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.26■■□□□ 1.47
SOX1O00570 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SOX1O00570 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SOX1O00570 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.25■■□□□ 1.47
SOX1O00570 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOX1O00570 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOX1O00570 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SOX1O00570 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SOX1O00570 AP006294.2-201ENST00000641667 209 ntBASIC24.25■■□□□ 1.47
SOX1O00570 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SOX1O00570 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.25■■□□□ 1.47
SOX1O00570 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.25■■□□□ 1.47
SOX1O00570 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.24■■□□□ 1.47
SOX1O00570 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SOX1O00570 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SOX1O00570 MIR1224-201ENST00000408193 85 ntBASIC24.24■■□□□ 1.47
SOX1O00570 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.24■■□□□ 1.47
SOX1O00570 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.24■■□□□ 1.47
SOX1O00570 AC133041.1-202ENST00000642053 222 ntBASIC24.24■■□□□ 1.47
SOX1O00570 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SOX1O00570 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SOX1O00570 AC133637.1-201ENST00000624115 1537 ntBASIC24.23■■□□□ 1.47
SOX1O00570 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
SOX1O00570 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SOX1O00570 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.23■■□□□ 1.47
SOX1O00570 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.23■■□□□ 1.47
SOX1O00570 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SOX1O00570 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.22■■□□□ 1.47
SOX1O00570 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.22■■□□□ 1.47
SOX1O00570 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SOX1O00570 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.22■■□□□ 1.47
SOX1O00570 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SOX1O00570 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.21■■□□□ 1.47
SOX1O00570 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.21■■□□□ 1.47
SOX1O00570 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
SOX1O00570 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
SOX1O00570 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SOX1O00570 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.2■■□□□ 1.46
SOX1O00570 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.2■■□□□ 1.46
SOX1O00570 DUSP5P2-201ENST00000426873 1033 ntBASIC24.2■■□□□ 1.46
SOX1O00570 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC24.2■■□□□ 1.46
SOX1O00570 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.2■■□□□ 1.46
SOX1O00570 AC005181.1-201ENST00000604782 1256 ntBASIC24.2■■□□□ 1.46
SOX1O00570 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
SOX1O00570 AC141586.4-201ENST00000624558 1573 ntBASIC24.2■■□□□ 1.46
SOX1O00570 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SOX1O00570 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
SOX1O00570 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.19■■□□□ 1.46
SOX1O00570 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SOX1O00570 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SOX1O00570 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SOX1O00570 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SOX1O00570 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
SOX1O00570 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.18■■□□□ 1.46
SOX1O00570 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.18■■□□□ 1.46
SOX1O00570 AC073210.2-201ENST00000430369 194 ntBASIC24.18■■□□□ 1.46
SOX1O00570 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.18■■□□□ 1.46
SOX1O00570 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SOX1O00570 RNA5SP413-201ENST00000516373 109 ntBASIC24.18■■□□□ 1.46
SOX1O00570 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.18■■□□□ 1.46
SOX1O00570 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms