Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
MEIS3P1A6NDR6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MEIS3P1A6NDR6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.14■□□□□ 0.66
MEIS3P1A6NDR6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MEIS3P1A6NDR6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.14■□□□□ 0.66
MEIS3P1A6NDR6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MEIS3P1A6NDR6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 AL022069.1-201ENST00000568025 1636 ntBASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MEIS3P1A6NDR6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
MEIS3P1A6NDR6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MEIS3P1A6NDR6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MEIS3P1A6NDR6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 ALDH1A3-203ENST00000557963 1670 ntBASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 RPS2P7-201ENST00000447334 885 ntBASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MEIS3P1A6NDR6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms