Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 AP005435.1-201ENST00000529293 1178 ntBASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TRIM43BA6NCK2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 AC137761.2-201ENST00000561729 223 ntBASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 AC145350.3-201ENST00000569033 163 ntBASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM43BA6NCK2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 AC016769.1-201ENST00000409132 1010 ntBASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM43BA6NCK2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 AC026185.1-201ENST00000445748 174 ntBASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.72■■□□□ 1.55
TRIM43BA6NCK2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.71■■□□□ 1.55
TRIM43BA6NCK2 AC092803.2-201ENST00000564287 1899 ntBASIC24.7■■□□□ 1.55
TRIM43BA6NCK2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM43BA6NCK2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 OR2I1P-207ENST00000453522 948 ntBASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 AL499627.2-201ENST00000606283 725 ntBASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 TMEM191A-211ENST00000637163 1067 ntBASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 AC105233.4-201ENST00000642045 216 ntBASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM43BA6NCK2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 AL355802.2-201ENST00000402069 882 ntBASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TRIM43BA6NCK2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TRIM43BA6NCK2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms