Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 MIR6821-201ENST00000617625 74 ntBASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
CCDC144AA2RUR9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 MIR5787-201ENST00000611784 55 ntBASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
CCDC144AA2RUR9 AC097381.1-201ENST00000429019 1296 ntBASIC32.51■■■□□ 2.8
CCDC144AA2RUR9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
CCDC144AA2RUR9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
CCDC144AA2RUR9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 AC104564.3-201ENST00000582367 638 ntBASIC32.51■■■□□ 2.79
CCDC144AA2RUR9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 AC004812.2-201ENST00000611079 2094 ntBASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 OR2I1P-207ENST00000453522 948 ntBASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CCDC144AA2RUR9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 AC126544.1-201ENST00000580842 1059 ntBASIC32.49■■■□□ 2.79
CCDC144AA2RUR9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC32.48■■■□□ 2.79
CCDC144AA2RUR9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CCDC144AA2RUR9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CCDC144AA2RUR9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 IGHV3-19-201ENST00000521488 291 ntBASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 LINC01529-204ENST00000636474 1715 ntBASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 TSPY26P-201ENST00000476365 1326 ntBASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CCDC144AA2RUR9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
CCDC144AA2RUR9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CCDC144AA2RUR9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 AC010525.1-201ENST00000585559 441 ntBASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 AC087623.3-201ENST00000607047 1098 ntBASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CCDC144AA2RUR9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 ANKRD20A6P-201ENST00000618763 204 ntBASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CCDC144AA2RUR9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms