Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00959A0A1B0GUT2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00959A0A1B0GUT2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00959A0A1B0GUT2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00959A0A1B0GUT2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00959A0A1B0GUT2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00959A0A1B0GUT2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 ESRRAP2-201ENST00000418437 1549 ntBASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 LINC00526-201ENST00000581067 1875 ntBASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00959A0A1B0GUT2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 ECEL1P1-201ENST00000373592 1742 ntBASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 MIR4508-201ENST00000584178 70 ntBASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LINC00959A0A1B0GUT2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 AL353803.4-201ENST00000565882 1934 ntBASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.21■□□□□ 0.02
LINC00959A0A1B0GUT2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LINC00959A0A1B0GUT2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LINC00959A0A1B0GUT2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms