Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 DUSP8P4-201ENST00000399538 1761 ntBASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC163A0A0D9SF12 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 AC080038.1-201ENST00000611274 1154 ntBASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC163A0A0D9SF12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 HLA-L-211ENST00000482052 1765 ntBASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 AC091060.1-201ENST00000623524 1766 ntBASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 DUX4L4-201ENST00000566884 1269 ntBASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC163A0A0D9SF12 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 AC010525.1-201ENST00000585559 441 ntBASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 AC105233.4-201ENST00000642045 216 ntBASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
CCDC163A0A0D9SF12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC163A0A0D9SF12 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CCDC163A0A0D9SF12 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.39■■□□□ 1.18
CCDC163A0A0D9SF12 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.39■■□□□ 1.18
CCDC163A0A0D9SF12 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCDC163A0A0D9SF12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 RAP2CP1-201ENST00000605103 478 ntBASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCDC163A0A0D9SF12 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCDC163A0A0D9SF12 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CCDC163A0A0D9SF12 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CCDC163A0A0D9SF12 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 AC016769.1-201ENST00000409132 1010 ntBASIC22.34■■□□□ 1.17
CCDC163A0A0D9SF12 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms