Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 AL031848.2-201ENST00000607670 837 ntBASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV12-3A0A0B4J271 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV12-3A0A0B4J271 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-3A0A0B4J271 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV12-3A0A0B4J271 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRAV12-3A0A0B4J271 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV12-3A0A0B4J271 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV12-3A0A0B4J271 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV12-3A0A0B4J271 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV12-3A0A0B4J271 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV12-3A0A0B4J271 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV12-3A0A0B4J271 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 TK2-202ENST00000417693 1046 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV12-3A0A0B4J271 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 SNX5-217ENST00000606557 1087 ntBASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 AC079630.1-202ENST00000618127 1840 ntBASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV12-3A0A0B4J271 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 AC137630.3-201ENST00000607245 391 ntBASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV12-3A0A0B4J271 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms