Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 AC242852.2-201ENST00000615738 1807 ntBASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MIR6765-201ENST00000614092 87 ntBASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-1A0A0A6YYK1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MIR4449-201ENST00000578365 66 ntBASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
TRAV8-1A0A0A6YYK1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 DUX4L9-201ENST00000449051 1259 ntBASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-1A0A0A6YYK1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV8-1A0A0A6YYK1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.96■□□□□ 0.3
TRAV8-1A0A0A6YYK1 AC079630.1-202ENST00000618127 1840 ntBASIC16.96■□□□□ 0.3
TRAV8-1A0A0A6YYK1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV8-1A0A0A6YYK1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 AL137060.1-201ENST00000618151 2648 ntBASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV8-1A0A0A6YYK1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-1A0A0A6YYK1 ESRRAP2-201ENST00000418437 1549 ntBASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 LONRF2P2-201ENST00000439212 571 ntBASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-1A0A0A6YYK1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms