Protein–RNA interactions for Protein: Q06688

BER1, SRR1-like protein BER1, yeastyeast

Known RBP Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BER1Q06688 FTR1YER145C 1215 nt9.18□□□□□ -0.94
BER1Q06688 WSC2YNL283C 1512 nt9.17□□□□□ -0.94
BER1Q06688 PBP1YGR178C 2169 nt9.16□□□□□ -0.94
BER1Q06688 FMP45YDL222C 930 nt9.14□□□□□ -0.95
BER1Q06688 CYT2YKL087C 675 nt9.14□□□□□ -0.95
BER1Q06688 TRM5YHR070W 1500 nt9.14□□□□□ -0.95
BER1Q06688 GAL1YBR020W 1587 nt9.13□□□□□ -0.95
BER1Q06688 DDR2YOL052C-A 186 nt9.13□□□□□ -0.95
BER1Q06688 YDL086C-AYDL086C-A 435 nt9.11□□□□□ -0.95
BER1Q06688 PUS2YGL063W 1113 nt9.11□□□□□ -0.95
BER1Q06688 FRD1YEL047C 1413 nt9.11□□□□□ -0.95
BER1Q06688 YCL074WYCL074W 927 nt9.1□□□□□ -0.95
BER1Q06688 YGR259CYGR259C 441 nt9.1□□□□□ -0.95
BER1Q06688 BNA2YJR078W 1362 nt9.1□□□□□ -0.95
BER1Q06688 AGP1YCL025C 1902 nt9.09□□□□□ -0.95
BER1Q06688 IRC24YIR036C 792 nt9.09□□□□□ -0.95
BER1Q06688 YKR040CYKR040C 504 nt9.08□□□□□ -0.96
BER1Q06688 MIC12YBR262C 321 nt9.08□□□□□ -0.96
BER1Q06688 ANP1YEL036C 1503 nt9.08□□□□□ -0.96
BER1Q06688 ERV46YAL042W 1248 nt9.07□□□□□ -0.96
BER1Q06688 DUS1YML080W 1272 nt9.07□□□□□ -0.96
BER1Q06688 DIC1YLR348C 897 nt9.05□□□□□ -0.96
BER1Q06688 AQY1YPR192W 918 nt9.05□□□□□ -0.96
BER1Q06688 YPR011CYPR011C 981 nt9.04□□□□□ -0.96
BER1Q06688 CMP2YML057W 1815 nt9.01□□□□□ -0.97
BER1Q06688 LPX1YOR084W 1164 nt8.99□□□□□ -0.97
BER1Q06688 HHO1YPL127C 777 nt8.98□□□□□ -0.97
BER1Q06688 FEN2YCR028C 1539 nt8.96□□□□□ -0.97
BER1Q06688 YDR524C-BYDR524C-B 201 nt8.96□□□□□ -0.98
BER1Q06688 STB1YNL309W 1263 nt8.96□□□□□ -0.98
BER1Q06688 SPC25YER018C 666 nt8.94□□□□□ -0.98
BER1Q06688 tM(CAU)CtM(CAU)C 72 nt8.94□□□□□ -0.98
BER1Q06688 IMT4tM(CAU)E 72 nt8.94□□□□□ -0.98
BER1Q06688 IMT3tM(CAU)J3 72 nt8.94□□□□□ -0.98
BER1Q06688 IMT1tM(CAU)O1 72 nt8.94□□□□□ -0.98
BER1Q06688 IMT2tM(CAU)P 72 nt8.94□□□□□ -0.98
BER1Q06688 RDN18-1RDN18-1 1800 nt8.92□□□□□ -0.98
BER1Q06688 RDN18-2RDN18-2 1800 nt8.92□□□□□ -0.98
BER1Q06688 XDJ1YLR090W 1380 nt8.92□□□□□ -0.98
BER1Q06688 STR3YGL184C 1398 nt8.9□□□□□ -0.98
BER1Q06688 GPI16YHR188C 1833 nt8.9□□□□□ -0.98
BER1Q06688 YIR016WYIR016W 798 nt8.9□□□□□ -0.98
BER1Q06688 YAT1YAR035W 2064 nt8.89□□□□□ -0.99
BER1Q06688 YGR201CYGR201C 678 nt8.88□□□□□ -0.99
BER1Q06688 HSL7YBR133C 2484 nt8.87□□□□□ -0.99
BER1Q06688 NDI1YML120C 1542 nt8.85□□□□□ -0.99
BER1Q06688 VPS60YDR486C 690 nt8.85□□□□□ -0.99
BER1Q06688 YLR235CYLR235C 399 nt8.84□□□□□ -0.99
BER1Q06688 DUT1YBR252W 444 nt8.84□□□□□ -0.99
BER1Q06688 RDN25-1RDN25-1 3396 nt8.82□□□□□ -1
BER1Q06688 RDN25-2RDN25-2 3396 nt8.82□□□□□ -1
BER1Q06688 TIM23YNR017W 669 nt8.81□□□□□ -1
BER1Q06688 FRE6YLL051C 2139 nt8.81□□□□□ -1
BER1Q06688 CCT4YDL143W 1587 nt8.81□□□□□ -1
BER1Q06688 RTN2YDL204W 1182 nt8.8□□□□□ -1
BER1Q06688 YLR179CYLR179C 606 nt8.8□□□□□ -1
BER1Q06688 ALG3YBL082C 1377 nt8.8□□□□□ -1
BER1Q06688 AQY2YLL052C 450 nt8.79□□□□□ -1
BER1Q06688 PTH1YHR189W 573 nt8.77□□□□□ -1.01
BER1Q06688 GDH3YAL062W 1374 nt8.76□□□□□ -1.01
BER1Q06688 AHT1YHR093W 549 nt8.75□□□□□ -1.01
BER1Q06688 SWC5YBR231C 912 nt8.75□□□□□ -1.01
BER1Q06688 GOR1YNL274C 1053 nt8.74□□□□□ -1.01
BER1Q06688 SPT20YOL148C 1815 nt8.74□□□□□ -1.01
BER1Q06688 AVT6YER119C 1347 nt8.73□□□□□ -1.01
BER1Q06688 HEL2YDR266C 1920 nt8.7□□□□□ -1.02
BER1Q06688 YPR064WYPR064W 420 nt8.68□□□□□ -1.02
BER1Q06688 INA1YLR413W 2028 nt8.67□□□□□ -1.02
BER1Q06688 RPC82YPR190C 1965 nt8.67□□□□□ -1.02
BER1Q06688 HIF1YLL022C 1158 nt8.65□□□□□ -1.02
BER1Q06688 YKL030WYKL030W 606 nt8.64□□□□□ -1.03
BER1Q06688 ALD4YOR374W 1560 nt8.61□□□□□ -1.03
BER1Q06688 PLB1YMR008C 1995 nt8.61□□□□□ -1.03
BER1Q06688 MET2YNL277W 1461 nt8.6□□□□□ -1.03
BER1Q06688 PRM5YIL117C 957 nt8.58□□□□□ -1.04
BER1Q06688 TAD3YLR316C 969 nt8.58□□□□□ -1.04
BER1Q06688 SPP1YPL138C 1062 nt8.58□□□□□ -1.04
BER1Q06688 ARP6YLR085C 1317 nt8.56□□□□□ -1.04
BER1Q06688 SFP1YLR403W 2052 nt8.56□□□□□ -1.04
BER1Q06688 GID7YCL039W 2238 nt8.56□□□□□ -1.04
BER1Q06688 SHM2YLR058C 1410 nt8.54□□□□□ -1.04
BER1Q06688 NBP35YGL091C 987 nt8.53□□□□□ -1.04
BER1Q06688 DAT1YML113W 747 nt8.53□□□□□ -1.04
BER1Q06688 RIM8YGL045W 1629 nt8.53□□□□□ -1.04
BER1Q06688 NPP1YCR026C 2229 nt8.52□□□□□ -1.05
BER1Q06688 SSN3YPL042C 1668 nt8.51□□□□□ -1.05
BER1Q06688 TIM17YJL143W 477 nt8.5□□□□□ -1.05
BER1Q06688 BDH1YAL060W 1149 nt8.5□□□□□ -1.05
BER1Q06688 YLR415CYLR415C 339 nt8.5□□□□□ -1.05
BER1Q06688 MUP1YGR055W 1725 nt8.49□□□□□ -1.05
BER1Q06688 YGL114WYGL114W 2178 nt8.48□□□□□ -1.05
BER1Q06688 YCR102CYCR102C 1107 nt8.47□□□□□ -1.05
BER1Q06688 ZRT3YKL175W 1512 nt8.47□□□□□ -1.05
BER1Q06688 NIT1YIL164C 600 nt8.46□□□□□ -1.06
BER1Q06688 UTR1YJR049C 1593 nt8.45□□□□□ -1.06
BER1Q06688 SAM35YHR083W 990 nt8.43□□□□□ -1.06
BER1Q06688 HOL1YNR055C 1761 nt8.42□□□□□ -1.06
BER1Q06688 tL(GAG)GtL(GAG)G 82 nt8.4□□□□□ -1.06
BER1Q06688 YJL067WYJL067W 351 nt8.39□□□□□ -1.07
BER1Q06688 HMG2YLR450W 3138 nt8.38□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms