Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 YFL067WYFL067W 528 nt9.52□□□□□ -0.89
VBA1Q04301 YPR011CYPR011C 981 nt9.52□□□□□ -0.89
VBA1Q04301 FMP45YDL222C 930 nt9.49□□□□□ -0.89
VBA1Q04301 FTR1YER145C 1215 nt9.49□□□□□ -0.89
VBA1Q04301 BMT6YLR063W 1098 nt9.49□□□□□ -0.89
VBA1Q04301 YKR005CYKR005C 1578 nt9.48□□□□□ -0.89
VBA1Q04301 BIO5YNR056C 1686 nt9.48□□□□□ -0.89
VBA1Q04301 SNF1YDR477W 1902 nt9.47□□□□□ -0.89
VBA1Q04301 FRD1YEL047C 1413 nt9.46□□□□□ -0.9
VBA1Q04301 GAL1YBR020W 1587 nt9.46□□□□□ -0.9
VBA1Q04301 TRM5YHR070W 1500 nt9.45□□□□□ -0.9
VBA1Q04301 ERV46YAL042W 1248 nt9.44□□□□□ -0.9
VBA1Q04301 WSC2YNL283C 1512 nt9.44□□□□□ -0.9
VBA1Q04301 YKR040CYKR040C 504 nt9.43□□□□□ -0.9
VBA1Q04301 PBP1YGR178C 2169 nt9.43□□□□□ -0.9
VBA1Q04301 DDR2YOL052C-A 186 nt9.42□□□□□ -0.9
VBA1Q04301 YDL086C-AYDL086C-A 435 nt9.4□□□□□ -0.9
VBA1Q04301 LPX1YOR084W 1164 nt9.4□□□□□ -0.9
VBA1Q04301 AGP1YCL025C 1902 nt9.4□□□□□ -0.9
VBA1Q04301 CYT2YKL087C 675 nt9.39□□□□□ -0.91
VBA1Q04301 DIC1YLR348C 897 nt9.39□□□□□ -0.91
VBA1Q04301 ANP1YEL036C 1503 nt9.39□□□□□ -0.91
VBA1Q04301 BNA2YJR078W 1362 nt9.38□□□□□ -0.91
VBA1Q04301 MIC12YBR262C 321 nt9.38□□□□□ -0.91
VBA1Q04301 YCL074WYCL074W 927 nt9.37□□□□□ -0.91
VBA1Q04301 YGR259CYGR259C 441 nt9.37□□□□□ -0.91
VBA1Q04301 IRC24YIR036C 792 nt9.34□□□□□ -0.91
VBA1Q04301 DUS1YML080W 1272 nt9.34□□□□□ -0.91
VBA1Q04301 AQY1YPR192W 918 nt9.3□□□□□ -0.92
VBA1Q04301 YDR524C-BYDR524C-B 201 nt9.27□□□□□ -0.93
VBA1Q04301 FEN2YCR028C 1539 nt9.26□□□□□ -0.93
VBA1Q04301 STB1YNL309W 1263 nt9.26□□□□□ -0.93
VBA1Q04301 HHO1YPL127C 777 nt9.26□□□□□ -0.93
VBA1Q04301 SPC25YER018C 666 nt9.25□□□□□ -0.93
VBA1Q04301 XDJ1YLR090W 1380 nt9.23□□□□□ -0.93
VBA1Q04301 RDN18-1RDN18-1 1800 nt9.22□□□□□ -0.93
VBA1Q04301 RDN18-2RDN18-2 1800 nt9.22□□□□□ -0.93
VBA1Q04301 CMP2YML057W 1815 nt9.21□□□□□ -0.93
VBA1Q04301 GPI16YHR188C 1833 nt9.21□□□□□ -0.94
VBA1Q04301 YIR016WYIR016W 798 nt9.19□□□□□ -0.94
VBA1Q04301 STR3YGL184C 1398 nt9.18□□□□□ -0.94
VBA1Q04301 YGR201CYGR201C 678 nt9.18□□□□□ -0.94
VBA1Q04301 VPS60YDR486C 690 nt9.16□□□□□ -0.94
VBA1Q04301 YLR235CYLR235C 399 nt9.16□□□□□ -0.94
VBA1Q04301 YAT1YAR035W 2064 nt9.16□□□□□ -0.94
VBA1Q04301 PTH1YHR189W 573 nt9.14□□□□□ -0.95
VBA1Q04301 TIM23YNR017W 669 nt9.14□□□□□ -0.95
VBA1Q04301 HSL7YBR133C 2484 nt9.13□□□□□ -0.95
VBA1Q04301 DUT1YBR252W 444 nt9.13□□□□□ -0.95
VBA1Q04301 YLR179CYLR179C 606 nt9.12□□□□□ -0.95
VBA1Q04301 SPP1YPL138C 1062 nt9.12□□□□□ -0.95
VBA1Q04301 CCT4YDL143W 1587 nt9.12□□□□□ -0.95
VBA1Q04301 ALG3YBL082C 1377 nt9.12□□□□□ -0.95
VBA1Q04301 RTN2YDL204W 1182 nt9.08□□□□□ -0.96
VBA1Q04301 NDI1YML120C 1542 nt9.08□□□□□ -0.96
VBA1Q04301 AHT1YHR093W 549 nt9.07□□□□□ -0.96
VBA1Q04301 AQY2YLL052C 450 nt9.07□□□□□ -0.96
VBA1Q04301 SWC5YBR231C 912 nt9.06□□□□□ -0.96
VBA1Q04301 GDH3YAL062W 1374 nt9.02□□□□□ -0.97
VBA1Q04301 YKL030WYKL030W 606 nt9.02□□□□□ -0.97
VBA1Q04301 AVT6YER119C 1347 nt9.02□□□□□ -0.97
VBA1Q04301 GOR1YNL274C 1053 nt9.01□□□□□ -0.97
VBA1Q04301 YPR064WYPR064W 420 nt8.98□□□□□ -0.97
VBA1Q04301 SPT20YOL148C 1815 nt8.97□□□□□ -0.97
VBA1Q04301 RDN25-1RDN25-1 3396 nt8.96□□□□□ -0.97
VBA1Q04301 RDN25-2RDN25-2 3396 nt8.96□□□□□ -0.97
VBA1Q04301 RPM1RPM1 483 nt8.94□□□□□ -0.98
VBA1Q04301 RPC82YPR190C 1965 nt8.92□□□□□ -0.98
VBA1Q04301 HIF1YLL022C 1158 nt8.9□□□□□ -0.98
VBA1Q04301 INA1YLR413W 2028 nt8.9□□□□□ -0.99
VBA1Q04301 PLB1YMR008C 1995 nt8.89□□□□□ -0.99
VBA1Q04301 TAD3YLR316C 969 nt8.88□□□□□ -0.99
VBA1Q04301 PRM5YIL117C 957 nt8.86□□□□□ -0.99
VBA1Q04301 SHM2YLR058C 1410 nt8.86□□□□□ -0.99
VBA1Q04301 ALD4YOR374W 1560 nt8.86□□□□□ -0.99
VBA1Q04301 ARP6YLR085C 1317 nt8.84□□□□□ -0.99
VBA1Q04301 DAT1YML113W 747 nt8.84□□□□□ -0.99
VBA1Q04301 BDH1YAL060W 1149 nt8.82□□□□□ -1
VBA1Q04301 NBP35YGL091C 987 nt8.81□□□□□ -1
VBA1Q04301 RTG1YOL067C 534 nt8.8□□□□□ -1
VBA1Q04301 HEL2YDR266C 1920 nt8.8□□□□□ -1
VBA1Q04301 YLR415CYLR415C 339 nt8.79□□□□□ -1
VBA1Q04301 tL(GAG)GtL(GAG)G 82 nt8.77□□□□□ -1.01
VBA1Q04301 NIT1YIL164C 600 nt8.77□□□□□ -1.01
VBA1Q04301 TIM17YJL143W 477 nt8.77□□□□□ -1.01
VBA1Q04301 RIM8YGL045W 1629 nt8.74□□□□□ -1.01
VBA1Q04301 YCR102CYCR102C 1107 nt8.74□□□□□ -1.01
VBA1Q04301 UTR1YJR049C 1593 nt8.73□□□□□ -1.01
VBA1Q04301 HUA1YGR268C 597 nt8.72□□□□□ -1.01
VBA1Q04301 ZRT3YKL175W 1512 nt8.71□□□□□ -1.01
VBA1Q04301 MUP1YGR055W 1725 nt8.71□□□□□ -1.02
VBA1Q04301 YGL114WYGL114W 2178 nt8.7□□□□□ -1.02
VBA1Q04301 FRE6YLL051C 2139 nt8.68□□□□□ -1.02
VBA1Q04301 SGT2YOR007C 1041 nt8.68□□□□□ -1.02
VBA1Q04301 YSP3YOR003W 1437 nt8.67□□□□□ -1.02
VBA1Q04301 HOL1YNR055C 1761 nt8.66□□□□□ -1.02
VBA1Q04301 SAM35YHR083W 990 nt8.64□□□□□ -1.03
VBA1Q04301 YJL067WYJL067W 351 nt8.64□□□□□ -1.03
VBA1Q04301 GAP1YKR039W 1809 nt8.64□□□□□ -1.03
VBA1Q04301 LSC2YGR244C 1284 nt8.62□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 35.4 ms