Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 SNF6YHL025W 999 nt8.79□□□□□ -1
RPA43P46669 AAC1YMR056C 930 nt8.79□□□□□ -1
RPA43P46669 BIO4YNR057C 714 nt8.78□□□□□ -1
RPA43P46669 HSL7YBR133C 2484 nt8.78□□□□□ -1
RPA43P46669 DIC1YLR348C 897 nt8.77□□□□□ -1.01
RPA43P46669 RDN25-1RDN25-1 3396 nt8.77□□□□□ -1.01
RPA43P46669 RDN25-2RDN25-2 3396 nt8.77□□□□□ -1.01
RPA43P46669 PRP4YPR178W 1398 nt8.76□□□□□ -1.01
RPA43P46669 TIM23YNR017W 669 nt8.75□□□□□ -1.01
RPA43P46669 RNQ1YCL028W 1218 nt8.73□□□□□ -1.01
RPA43P46669 YIH1YCR059C 777 nt8.72□□□□□ -1.01
RPA43P46669 DPS1YLL018C 1674 nt8.72□□□□□ -1.01
RPA43P46669 tL(GAG)GtL(GAG)G 82 nt8.69□□□□□ -1.02
RPA43P46669 YLR179CYLR179C 606 nt8.69□□□□□ -1.02
RPA43P46669 BMT6YLR063W 1098 nt8.68□□□□□ -1.02
RPA43P46669 YPR064WYPR064W 420 nt8.66□□□□□ -1.02
RPA43P46669 YHR056W-AYHR056W-A 435 nt8.64□□□□□ -1.03
RPA43P46669 BIO5YNR056C 1686 nt8.62□□□□□ -1.03
RPA43P46669 CCA1YER168C 1641 nt8.62□□□□□ -1.03
RPA43P46669 CMP2YML057W 1815 nt8.61□□□□□ -1.03
RPA43P46669 AHT1YHR093W 549 nt8.61□□□□□ -1.03
RPA43P46669 ERF2YLR246W 1080 nt8.61□□□□□ -1.03
RPA43P46669 TAD3YLR316C 969 nt8.61□□□□□ -1.03
RPA43P46669 AQY1YPR192W 918 nt8.61□□□□□ -1.03
RPA43P46669 PBP1YGR178C 2169 nt8.61□□□□□ -1.03
RPA43P46669 CYT2YKL087C 675 nt8.6□□□□□ -1.03
RPA43P46669 YLL053CYLL053C 459 nt8.6□□□□□ -1.03
RPA43P46669 WSC2YNL283C 1512 nt8.59□□□□□ -1.03
RPA43P46669 YFL015W-AYFL015W-A 318 nt8.59□□□□□ -1.03
RPA43P46669 YFR018CYFR018C 1092 nt8.59□□□□□ -1.03
RPA43P46669 CRR1YLR213C 1269 nt8.59□□□□□ -1.03
RPA43P46669 SNF1YDR477W 1902 nt8.58□□□□□ -1.04
RPA43P46669 YKR005CYKR005C 1578 nt8.57□□□□□ -1.04
RPA43P46669 FTR1YER145C 1215 nt8.57□□□□□ -1.04
RPA43P46669 RAX1YOR301W 1308 nt8.56□□□□□ -1.04
RPA43P46669 GAL1YBR020W 1587 nt8.54□□□□□ -1.04
RPA43P46669 RRT5YFR032C 870 nt8.54□□□□□ -1.04
RPA43P46669 HEM12YDR047W 1089 nt8.52□□□□□ -1.05
RPA43P46669 PAU16YKL224C 372 nt8.52□□□□□ -1.05
RPA43P46669 HEL2YDR266C 1920 nt8.5□□□□□ -1.05
RPA43P46669 TRM5YHR070W 1500 nt8.5□□□□□ -1.05
RPA43P46669 SPC25YER018C 666 nt8.48□□□□□ -1.05
RPA43P46669 YFL067WYFL067W 528 nt8.48□□□□□ -1.05
RPA43P46669 STB1YNL309W 1263 nt8.48□□□□□ -1.05
RPA43P46669 IRC24YIR036C 792 nt8.47□□□□□ -1.05
RPA43P46669 PRE6YOL038W 765 nt8.47□□□□□ -1.05
RPA43P46669 MIC10YCL057C-A 294 nt8.47□□□□□ -1.05
RPA43P46669 YGR259CYGR259C 441 nt8.46□□□□□ -1.06
RPA43P46669 DDR2YOL052C-A 186 nt8.46□□□□□ -1.06
RPA43P46669 PEX25YPL112C 1185 nt8.46□□□□□ -1.06
RPA43P46669 ATF2YGR177C 1608 nt8.45□□□□□ -1.06
RPA43P46669 BDH1YAL060W 1149 nt8.45□□□□□ -1.06
RPA43P46669 GPI16YHR188C 1833 nt8.45□□□□□ -1.06
RPA43P46669 CCT4YDL143W 1587 nt8.44□□□□□ -1.06
RPA43P46669 YDR524C-BYDR524C-B 201 nt8.44□□□□□ -1.06
RPA43P46669 YLR415CYLR415C 339 nt8.44□□□□□ -1.06
RPA43P46669 SNG1YGR197C 1644 nt8.43□□□□□ -1.06
RPA43P46669 YSP3YOR003W 1437 nt8.43□□□□□ -1.06
RPA43P46669 SSN3YPL042C 1668 nt8.41□□□□□ -1.06
RPA43P46669 YCL074WYCL074W 927 nt8.41□□□□□ -1.06
RPA43P46669 YDL086C-AYDL086C-A 435 nt8.41□□□□□ -1.06
RPA43P46669 DUS1YML080W 1272 nt8.41□□□□□ -1.06
RPA43P46669 SWC5YBR231C 912 nt8.4□□□□□ -1.06
RPA43P46669 YFL066CYFL066C 1179 nt8.39□□□□□ -1.07
RPA43P46669 YNL115CYNL115C 1935 nt8.39□□□□□ -1.07
RPA43P46669 VPS60YDR486C 690 nt8.38□□□□□ -1.07
RPA43P46669 ANP1YEL036C 1503 nt8.37□□□□□ -1.07
RPA43P46669 NDI1YML120C 1542 nt8.37□□□□□ -1.07
RPA43P46669 FEN2YCR028C 1539 nt8.36□□□□□ -1.07
RPA43P46669 BNA2YJR078W 1362 nt8.35□□□□□ -1.07
RPA43P46669 YAT1YAR035W 2064 nt8.35□□□□□ -1.07
RPA43P46669 ALG3YBL082C 1377 nt8.33□□□□□ -1.08
RPA43P46669 NAT4YMR069W 858 nt8.32□□□□□ -1.08
RPA43P46669 AGP1YCL025C 1902 nt8.32□□□□□ -1.08
RPA43P46669 VPS75YNL246W 795 nt8.31□□□□□ -1.08
RPA43P46669 GID7YCL039W 2238 nt8.29□□□□□ -1.08
RPA43P46669 MET2YNL277W 1461 nt8.29□□□□□ -1.08
RPA43P46669 NPP1YCR026C 2229 nt8.29□□□□□ -1.08
RPA43P46669 SFP1YLR403W 2052 nt8.28□□□□□ -1.08
RPA43P46669 YIR016WYIR016W 798 nt8.27□□□□□ -1.09
RPA43P46669 SBA1YKL117W 651 nt8.27□□□□□ -1.09
RPA43P46669 MIC12YBR262C 321 nt8.26□□□□□ -1.09
RPA43P46669 MIR1YJR077C 936 nt8.24□□□□□ -1.09
RPA43P46669 SPT20YOL148C 1815 nt8.24□□□□□ -1.09
RPA43P46669 MSF1YPR047W 1410 nt8.23□□□□□ -1.09
RPA43P46669 TIM17YJL143W 477 nt8.23□□□□□ -1.09
RPA43P46669 THI74YDR438W 1113 nt8.22□□□□□ -1.09
RPA43P46669 FRE6YLL051C 2139 nt8.21□□□□□ -1.09
RPA43P46669 HHO1YPL127C 777 nt8.21□□□□□ -1.1
RPA43P46669 MAE1YKL029C 2010 nt8.2□□□□□ -1.1
RPA43P46669 PAU7YAR020C 168 nt8.19□□□□□ -1.1
RPA43P46669 RDN18-1RDN18-1 1800 nt8.18□□□□□ -1.1
RPA43P46669 RDN18-2RDN18-2 1800 nt8.18□□□□□ -1.1
RPA43P46669 YGL114WYGL114W 2178 nt8.17□□□□□ -1.1
RPA43P46669 HMG2YLR450W 3138 nt8.16□□□□□ -1.1
RPA43P46669 SHM2YLR058C 1410 nt8.16□□□□□ -1.1
RPA43P46669 XDJ1YLR090W 1380 nt8.16□□□□□ -1.1
RPA43P46669 INA1YLR413W 2028 nt8.15□□□□□ -1.1
RPA43P46669 STR3YGL184C 1398 nt8.14□□□□□ -1.11
RPA43P46669 ESBP6YNL125C 2022 nt8.14□□□□□ -1.11
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms