Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 YFL067WYFL067W 528 nt8.33□□□□□ -1.08
VAR1P02381 PTH1YHR189W 573 nt8.33□□□□□ -1.08
VAR1P02381 SPP1YPL138C 1062 nt8.33□□□□□ -1.08
VAR1P02381 HEL2YDR266C 1920 nt8.33□□□□□ -1.08
VAR1P02381 TRM5YHR070W 1500 nt8.32□□□□□ -1.08
VAR1P02381 GAL1YBR020W 1587 nt8.31□□□□□ -1.08
VAR1P02381 YLR235CYLR235C 399 nt8.31□□□□□ -1.08
VAR1P02381 DDR2YOL052C-A 186 nt8.31□□□□□ -1.08
VAR1P02381 MOT3YMR070W 1473 nt8.31□□□□□ -1.08
VAR1P02381 MIC10YCL057C-A 294 nt8.3□□□□□ -1.08
VAR1P02381 GID7YCL039W 2238 nt8.3□□□□□ -1.08
VAR1P02381 YHR056W-AYHR056W-A 435 nt8.29□□□□□ -1.08
VAR1P02381 SNG1YGR197C 1644 nt8.29□□□□□ -1.08
VAR1P02381 YAT1YAR035W 2064 nt8.28□□□□□ -1.08
VAR1P02381 AAC1YMR056C 930 nt8.28□□□□□ -1.08
VAR1P02381 MET2YNL277W 1461 nt8.27□□□□□ -1.09
VAR1P02381 CMP2YML057W 1815 nt8.27□□□□□ -1.09
VAR1P02381 TIM23YNR017W 669 nt8.26□□□□□ -1.09
VAR1P02381 AQY1YPR192W 918 nt8.26□□□□□ -1.09
VAR1P02381 YDL086C-AYDL086C-A 435 nt8.25□□□□□ -1.09
VAR1P02381 RAX1YOR301W 1308 nt8.25□□□□□ -1.09
VAR1P02381 SFP1YLR403W 2052 nt8.25□□□□□ -1.09
VAR1P02381 YLR179CYLR179C 606 nt8.24□□□□□ -1.09
VAR1P02381 NPP1YCR026C 2229 nt8.23□□□□□ -1.09
VAR1P02381 CYT2YKL087C 675 nt8.21□□□□□ -1.1
VAR1P02381 PBP1YGR178C 2169 nt8.21□□□□□ -1.1
VAR1P02381 FUR4YBR021W 1902 nt8.21□□□□□ -1.1
VAR1P02381 YDR524C-BYDR524C-B 201 nt8.2□□□□□ -1.1
VAR1P02381 YKL030WYKL030W 606 nt8.2□□□□□ -1.1
VAR1P02381 STB1YNL309W 1263 nt8.2□□□□□ -1.1
VAR1P02381 BNA2YJR078W 1362 nt8.2□□□□□ -1.1
VAR1P02381 ANP1YEL036C 1503 nt8.19□□□□□ -1.1
VAR1P02381 PRP4YPR178W 1398 nt8.19□□□□□ -1.1
VAR1P02381 GPI16YHR188C 1833 nt8.17□□□□□ -1.1
VAR1P02381 SPC25YER018C 666 nt8.17□□□□□ -1.1
VAR1P02381 YEL076C-AYEL076C-A 651 nt8.16□□□□□ -1.1
VAR1P02381 YEL076CYEL076C 651 nt8.16□□□□□ -1.1
VAR1P02381 CCA1YER168C 1641 nt8.16□□□□□ -1.1
VAR1P02381 YLR464WYLR464W 651 nt8.16□□□□□ -1.1
VAR1P02381 FEN2YCR028C 1539 nt8.15□□□□□ -1.1
VAR1P02381 DPS1YLL018C 1674 nt8.14□□□□□ -1.11
VAR1P02381 BIO5YNR056C 1686 nt8.14□□□□□ -1.11
VAR1P02381 AHT1YHR093W 549 nt8.13□□□□□ -1.11
VAR1P02381 YPR064WYPR064W 420 nt8.13□□□□□ -1.11
VAR1P02381 WSC2YNL283C 1512 nt8.12□□□□□ -1.11
VAR1P02381 CCT4YDL143W 1587 nt8.11□□□□□ -1.11
VAR1P02381 FRE6YLL051C 2139 nt8.11□□□□□ -1.11
VAR1P02381 VPS60YDR486C 690 nt8.1□□□□□ -1.11
VAR1P02381 SWC5YBR231C 912 nt8.1□□□□□ -1.11
VAR1P02381 MIC12YBR262C 321 nt8.09□□□□□ -1.11
VAR1P02381 YIR016WYIR016W 798 nt8.08□□□□□ -1.12
VAR1P02381 HHO1YPL127C 777 nt8.08□□□□□ -1.12
VAR1P02381 BMT6YLR063W 1098 nt8.07□□□□□ -1.12
VAR1P02381 TAD3YLR316C 969 nt8.06□□□□□ -1.12
VAR1P02381 ESBP6YNL125C 2022 nt8.05□□□□□ -1.12
VAR1P02381 RTG1YOL067C 534 nt8.05□□□□□ -1.12
VAR1P02381 ALG3YBL082C 1377 nt8.05□□□□□ -1.12
VAR1P02381 DUS1YML080W 1272 nt8.04□□□□□ -1.12
VAR1P02381 SNF1YDR477W 1902 nt8.03□□□□□ -1.12
VAR1P02381 HMG2YLR450W 3138 nt8.02□□□□□ -1.13
VAR1P02381 YGR201CYGR201C 678 nt8□□□□□ -1.13
VAR1P02381 AGP1YCL025C 1902 nt7.99□□□□□ -1.13
VAR1P02381 NDI1YML120C 1542 nt7.99□□□□□ -1.13
VAR1P02381 TPO4YOR273C 1980 nt7.99□□□□□ -1.13
VAR1P02381 ILV2YMR108W 2064 nt7.99□□□□□ -1.13
VAR1P02381 BSP1YPR171W 1731 nt7.98□□□□□ -1.13
VAR1P02381 YCL074WYCL074W 927 nt7.97□□□□□ -1.13
VAR1P02381 HUA1YGR268C 597 nt7.97□□□□□ -1.13
VAR1P02381 tL(GAG)GtL(GAG)G 82 nt7.96□□□□□ -1.14
VAR1P02381 YLR415CYLR415C 339 nt7.96□□□□□ -1.14
VAR1P02381 MAE1YKL029C 2010 nt7.96□□□□□ -1.14
VAR1P02381 YKR005CYKR005C 1578 nt7.95□□□□□ -1.14
VAR1P02381 XDJ1YLR090W 1380 nt7.94□□□□□ -1.14
VAR1P02381 BDH1YAL060W 1149 nt7.93□□□□□ -1.14
VAR1P02381 AVT6YER119C 1347 nt7.93□□□□□ -1.14
VAR1P02381 UGA4YDL210W 1716 nt7.92□□□□□ -1.14
VAR1P02381 IRC24YIR036C 792 nt7.92□□□□□ -1.14
VAR1P02381 GDH3YAL062W 1374 nt7.92□□□□□ -1.14
VAR1P02381 GOR1YNL274C 1053 nt7.91□□□□□ -1.14
VAR1P02381 UBX6YJL048C 1191 nt7.9□□□□□ -1.14
VAR1P02381 MRPL8YJL063C 717 nt7.9□□□□□ -1.14
VAR1P02381 ADO1YJR105W 1023 nt7.9□□□□□ -1.14
VAR1P02381 DTR1YBR180W 1719 nt7.89□□□□□ -1.15
VAR1P02381 RFC1YOR217W 2586 nt7.89□□□□□ -1.15
VAR1P02381 TIM17YJL143W 477 nt7.88□□□□□ -1.15
VAR1P02381 DUT1YBR252W 444 nt7.88□□□□□ -1.15
VAR1P02381 GTB1YDR221W 2109 nt7.88□□□□□ -1.15
VAR1P02381 YGR259CYGR259C 441 nt7.87□□□□□ -1.15
VAR1P02381 URA8YJR103W 1737 nt7.86□□□□□ -1.15
VAR1P02381 SHM2YLR058C 1410 nt7.86□□□□□ -1.15
VAR1P02381 STR3YGL184C 1398 nt7.85□□□□□ -1.15
VAR1P02381 AQY2YLL052C 450 nt7.85□□□□□ -1.15
VAR1P02381 YSP3YOR003W 1437 nt7.85□□□□□ -1.15
VAR1P02381 SPT20YOL148C 1815 nt7.85□□□□□ -1.15
VAR1P02381 RDN18-1RDN18-1 1800 nt7.84□□□□□ -1.15
VAR1P02381 RDN18-2RDN18-2 1800 nt7.84□□□□□ -1.15
VAR1P02381 RIM8YGL045W 1629 nt7.81□□□□□ -1.16
VAR1P02381 YNL115CYNL115C 1935 nt7.79□□□□□ -1.16
VAR1P02381 GAL2YLR081W 1725 nt7.78□□□□□ -1.16
VAR1P02381 YGL114WYGL114W 2178 nt7.77□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms