Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRAV6A0A075B6T7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRAV6A0A075B6T7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRAV6A0A075B6T7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRAV6A0A075B6T7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRAV6A0A075B6T7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TRAV6A0A075B6T7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRAV6A0A075B6T7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.92■■□□□ 1.42
TRAV6A0A075B6T7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRAV6A0A075B6T7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TRAV6A0A075B6T7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRAV6A0A075B6T7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRAV6A0A075B6T7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAV6A0A075B6T7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAV6A0A075B6T7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TRAV6A0A075B6T7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRAV6A0A075B6T7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRAV6A0A075B6T7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRAV6A0A075B6T7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAV6A0A075B6T7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAV6A0A075B6T7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRAV6A0A075B6T7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRAV6A0A075B6T7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRAV6A0A075B6T7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.83■■□□□ 1.4
TRAV6A0A075B6T7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRAV6A0A075B6T7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
TRAV6A0A075B6T7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV6A0A075B6T7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAV6A0A075B6T7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAV6A0A075B6T7 AC139426.1-201ENST00000568218 2529 ntBASIC23.77■■□□□ 1.4
TRAV6A0A075B6T7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAV6A0A075B6T7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAV6A0A075B6T7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAV6A0A075B6T7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.73■■□□□ 1.39
TRAV6A0A075B6T7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAV6A0A075B6T7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.71■■□□□ 1.39
TRAV6A0A075B6T7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAV6A0A075B6T7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAV6A0A075B6T7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAV6A0A075B6T7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TRAV6A0A075B6T7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAV6A0A075B6T7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV6A0A075B6T7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAV6A0A075B6T7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAV6A0A075B6T7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV6A0A075B6T7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAV6A0A075B6T7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV6A0A075B6T7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.66■■□□□ 1.38
TRAV6A0A075B6T7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRAV6A0A075B6T7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRAV6A0A075B6T7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRAV6A0A075B6T7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.63■■□□□ 1.37
TRAV6A0A075B6T7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.6■■□□□ 1.37
TRAV6A0A075B6T7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TRAV6A0A075B6T7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC23.59■■□□□ 1.37
TRAV6A0A075B6T7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAV6A0A075B6T7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRAV6A0A075B6T7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRAV6A0A075B6T7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
TRAV6A0A075B6T7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRAV6A0A075B6T7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRAV6A0A075B6T7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.55■■□□□ 1.36
TRAV6A0A075B6T7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.53■■□□□ 1.36
TRAV6A0A075B6T7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV6A0A075B6T7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRAV6A0A075B6T7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
TRAV6A0A075B6T7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV6A0A075B6T7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV6A0A075B6T7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV6A0A075B6T7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV6A0A075B6T7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.46■■□□□ 1.35
TRAV6A0A075B6T7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
TRAV6A0A075B6T7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRAV6A0A075B6T7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRAV6A0A075B6T7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.45■■□□□ 1.34
TRAV6A0A075B6T7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV6A0A075B6T7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.44■■□□□ 1.34
TRAV6A0A075B6T7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TRAV6A0A075B6T7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TRAV6A0A075B6T7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV6A0A075B6T7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV6A0A075B6T7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV6A0A075B6T7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV6A0A075B6T7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV6A0A075B6T7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV6A0A075B6T7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRAV6A0A075B6T7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
TRAV6A0A075B6T7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRAV6A0A075B6T7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRAV6A0A075B6T7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
TRAV6A0A075B6T7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV6A0A075B6T7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRAV6A0A075B6T7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.37■■□□□ 1.33
TRAV6A0A075B6T7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRAV6A0A075B6T7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms