Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 STRCP1-201ENST00000509801 5328 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 POM121L14P-201ENST00000406100 1558 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC020917.4-201ENST00000623994 1999 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SNORA50C-201ENST00000408535 133 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SNORA50.1-201ENST00000628590 135 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS3Q9UNS2 AC024075.2-201ENST00000598112 1473 ntBASIC12.53□□□□□ -0.4
COPS3Q9UNS2 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 AP002353.1-201ENST00000528257 1599 ntBASIC12.52□□□□□ -0.4
COPS3Q9UNS2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 DLX4-206ENST00000611342 1662 ntBASIC12.52□□□□□ -0.4
COPS3Q9UNS2 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS3Q9UNS2 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 KRT43P-201ENST00000434019 910 ntBASIC12.52□□□□□ -0.41
COPS3Q9UNS2 RPL7P3-201ENST00000441388 714 ntBASIC12.52□□□□□ -0.41
COPS3Q9UNS2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AC012441.2-201ENST00000444843 739 ntBASIC12.52□□□□□ -0.41
COPS3Q9UNS2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms