Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRTAP9-4Q9BYQ2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 TTC8-206ENST00000380656 2171 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 TIPIN-201ENST00000261881 1744 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 UBE2A-211ENST00000631185 1435 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 Y_RNA.153-201ENST00000363615 91 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 Y_RNA.184-201ENST00000363884 108 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AL136309.1-201ENST00000403917 691 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AL358178.1-201ENST00000407698 397 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SEPT7P8-201ENST00000413308 775 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NIFKP9-201ENST00000419265 221 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 FAM197Y1-201ENST00000421178 764 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 ALMS1P1-201ENST00000428767 921 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 HMGB1P18-201ENST00000438801 619 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 USP40-206ENST00000443711 628 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 BUB3P1-201ENST00000458451 999 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 HSD17B7P2-201ENST00000471365 1033 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC128713.1-201ENST00000471495 306 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NME1-207ENST00000480143 964 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC112482.1-201ENST00000492080 688 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC090058.1-201ENST00000498788 435 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC027328.1-201ENST00000505784 335 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NDUFA2-204ENST00000512088 627 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AF111167.1-201ENST00000555909 704 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 C1QL1P1-201ENST00000568105 661 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 NPM1P45-201ENST00000583151 559 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MIR4785-201ENST00000585005 73 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC011444.2-201ENST00000587759 567 ntTSL 4 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 AP001330.4-201ENST00000604350 154 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 MEMO1P5-201ENST00000604810 406 ntBASIC5.69□□□□□ -1.5
KRTAP9-4Q9BYQ2 CD177P1-201ENST00000606252 935 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms