Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC097359.2-201ENST00000604992 2389 ntBASIC12.79□□□□□ -0.36
USB1Q9BQ65 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.79□□□□□ -0.36
USB1Q9BQ65 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
USB1Q9BQ65 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 MTHFR-210ENST00000641407 2387 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 ODCP-201ENST00000459650 1639 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC239868.1-201ENST00000369385 493 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 CYP46A4P-201ENST00000414953 267 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 XBP1P1-201ENST00000436573 652 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AP000547.1-201ENST00000454360 617 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 RN7SL11P-201ENST00000471305 293 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 SCARNA21-201ENST00000517026 139 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC073611.1-201ENST00000550263 647 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC020910.4-201ENST00000612269 540 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 AL354696.1-201ENST00000614652 497 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AC068587.10-201ENST00000641210 219 ntBASIC12.78□□□□□ -0.36
USB1Q9BQ65 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
USB1Q9BQ65 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
USB1Q9BQ65 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 AC018442.1-201ENST00000421439 2061 ntBASIC12.77□□□□□ -0.36
USB1Q9BQ65 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
USB1Q9BQ65 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.77□□□□□ -0.36
USB1Q9BQ65 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
USB1Q9BQ65 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
USB1Q9BQ65 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms