Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RN7SL720P-201ENST00000488178 304 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 HLA-J-204ENST00000495278 958 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.48□□□□□ -0.41
VRK1Q99986 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.48□□□□□ -0.41
VRK1Q99986 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.48□□□□□ -0.41
VRK1Q99986 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 AC009779.1-201ENST00000551138 283 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 FGFR3P5-201ENST00000564496 886 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 AC097724.1-201ENST00000609581 426 ntBASIC12.48□□□□□ -0.41
VRK1Q99986 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VRK1Q99986 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VRK1Q99986 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VRK1Q99986 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
VRK1Q99986 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 AC012617.1-204ENST00000586340 2305 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
VRK1Q99986 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 AL157407.1-201ENST00000435784 904 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 VDAC1P1-201ENST00000439229 848 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.47□□□□□ -0.41
VRK1Q99986 RN7SL769P-201ENST00000469386 295 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.47□□□□□ -0.41
VRK1Q99986 IMP3P2-201ENST00000489760 475 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 NUP210P1-202ENST00000504322 710 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.47□□□□□ -0.41
VRK1Q99986 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.47□□□□□ -0.41
VRK1Q99986 AC024681.1-201ENST00000521917 487 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 AL132994.2-201ENST00000603120 687 ntBASIC12.47□□□□□ -0.41
VRK1Q99986 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.47□□□□□ -0.41
VRK1Q99986 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
VRK1Q99986 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
VRK1Q99986 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
VRK1Q99986 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.46□□□□□ -0.41
VRK1Q99986 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.46□□□□□ -0.41
VRK1Q99986 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
VRK1Q99986 FAM90A7P-201ENST00000382628 1395 ntBASIC12.46□□□□□ -0.41
VRK1Q99986 FAM90A23P-201ENST00000400136 1395 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms