Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 AC100827.2-201ENST00000563214 1194 ntBASIC13.34□□□□□ -0.27
CGREF1Q99674 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.34□□□□□ -0.27
CGREF1Q99674 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.34□□□□□ -0.27
CGREF1Q99674 RHOXF1P1-202ENST00000635473 501 ntBASIC13.34□□□□□ -0.27
CGREF1Q99674 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 AC092117.1-201ENST00000621230 3250 ntBASIC13.34□□□□□ -0.27
CGREF1Q99674 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CGREF1Q99674 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.34□□□□□ -0.27
CGREF1Q99674 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.34□□□□□ -0.27
CGREF1Q99674 AL731571.1-201ENST00000617058 5428 ntBASIC13.34□□□□□ -0.27
CGREF1Q99674 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CGREF1Q99674 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.33□□□□□ -0.27
CGREF1Q99674 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC13.33□□□□□ -0.27
CGREF1Q99674 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.33□□□□□ -0.27
CGREF1Q99674 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CGREF1Q99674 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CGREF1Q99674 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.33□□□□□ -0.28
CGREF1Q99674 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 GPALPP1-207ENST00000611650 899 ntBASIC13.33□□□□□ -0.28
CGREF1Q99674 HERC2P10-201ENST00000570209 2393 ntBASIC13.33□□□□□ -0.28
CGREF1Q99674 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CGREF1Q99674 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 AC093462.1-201ENST00000621167 1683 ntBASIC13.33□□□□□ -0.28
CGREF1Q99674 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.33□□□□□ -0.28
CGREF1Q99674 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
CGREF1Q99674 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CGREF1Q99674 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CGREF1Q99674 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 LINC01815-202ENST00000641468 1409 ntBASIC13.32□□□□□ -0.28
CGREF1Q99674 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CGREF1Q99674 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms