Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCDC107Q8WV48 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AL022313.4-201ENST00000562756 2046 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MSNP1-201ENST00000511640 1732 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MIR1202-201ENST00000408529 83 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ARSEP1-201ENST00000420443 635 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AP005018.1-201ENST00000525475 301 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AC027237.1-201ENST00000560942 655 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AL596325.1-201ENST00000563991 1082 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AC027601.3-201ENST00000622907 509 ntBASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCDC107Q8WV48 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.17□□□□□ -0.46
CCDC107Q8WV48 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms