Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC00265-2P-201ENST00000413372 782 ntBASIC13.21□□□□□ -0.29
RAE1P78406 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.21□□□□□ -0.29
RAE1P78406 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.21□□□□□ -0.29
RAE1P78406 AKR7A2P1-201ENST00000460134 915 ntBASIC13.21□□□□□ -0.29
RAE1P78406 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 SCARNA20.5-201ENST00000516991 142 ntBASIC13.21□□□□□ -0.29
RAE1P78406 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.21□□□□□ -0.29
RAE1P78406 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.21□□□□□ -0.29
RAE1P78406 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RAE1P78406 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.21□□□□□ -0.29
RAE1P78406 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
RAE1P78406 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.21□□□□□ -0.3
RAE1P78406 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.21□□□□□ -0.3
RAE1P78406 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RAE1P78406 BEND3P3-201ENST00000611030 2440 ntBASIC13.21□□□□□ -0.3
RAE1P78406 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RAE1P78406 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.21□□□□□ -0.3
RAE1P78406 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.21□□□□□ -0.3
RAE1P78406 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RAE1P78406 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RAE1P78406 AC008132.1-202ENST00000342005 1389 ntBASIC13.2□□□□□ -0.3
RAE1P78406 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
RAE1P78406 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 AC008040.5-201ENST00000599781 1781 ntBASIC13.2□□□□□ -0.3
RAE1P78406 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RAE1P78406 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 GPAA1P2-201ENST00000417923 928 ntBASIC13.2□□□□□ -0.3
RAE1P78406 PDIA3P2-201ENST00000428073 158 ntBASIC13.2□□□□□ -0.3
RAE1P78406 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.2□□□□□ -0.3
RAE1P78406 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.2□□□□□ -0.3
RAE1P78406 KRT8P13-201ENST00000463294 1010 ntBASIC13.2□□□□□ -0.3
RAE1P78406 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.2□□□□□ -0.3
RAE1P78406 AC114947.1-202ENST00000514136 344 ntBASIC13.2□□□□□ -0.3
RAE1P78406 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 NDUFV2P1-201ENST00000596415 907 ntBASIC13.2□□□□□ -0.3
RAE1P78406 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.2□□□□□ -0.3
RAE1P78406 AL031673.1-201ENST00000611460 466 ntBASIC13.2□□□□□ -0.3
RAE1P78406 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.2□□□□□ -0.3
RAE1P78406 AC244452.3-201ENST00000636814 210 ntBASIC13.2□□□□□ -0.3
RAE1P78406 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 MEX3B-202ENST00000558133 4333 ntBASIC13.2□□□□□ -0.3
RAE1P78406 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RAE1P78406 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 AL356585.2-201ENST00000625078 2396 ntBASIC13.2□□□□□ -0.3
RAE1P78406 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RAE1P78406 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RAE1P78406 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 AC012531.1-201ENST00000562848 2680 ntBASIC13.19□□□□□ -0.3
RAE1P78406 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.19□□□□□ -0.3
RAE1P78406 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.19□□□□□ -0.3
RAE1P78406 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RAE1P78406 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RAE1P78406 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms