Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 TERF1P1-201ENST00000311003 1181 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AL596275.1-201ENST00000423464 877 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 RHOQP3-201ENST00000437982 621 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 GAPDHP40-201ENST00000505218 1006 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AP006294.2-201ENST00000641667 209 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AC006144.1-201ENST00000424220 1600 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PPP1R26P5-201ENST00000416640 3664 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AC245140.2-201ENST00000624054 1939 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ALAS1-201ENST00000310271 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 IMPDH1P4-201ENST00000445028 1534 ntBASIC10.42□□□□□ -0.74
HIST1H2BDP58876 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ZNF202-201ENST00000336139 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
HIST1H2BDP58876 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 EVL-214ENST00000555048 1715 ntTSL 3 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 FMO6P-201ENST00000236166 1620 ntBASIC10.41□□□□□ -0.74
HIST1H2BDP58876 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 URGCP-205ENST00000443736 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 HMGN1P19-201ENST00000436976 333 ntBASIC10.41□□□□□ -0.74
HIST1H2BDP58876 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 OR7E14P-202ENST00000530490 1290 ntBASIC10.41□□□□□ -0.74
HIST1H2BDP58876 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 RARRES2P8-201ENST00000566335 367 ntBASIC10.41□□□□□ -0.74
HIST1H2BDP58876 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC10.41□□□□□ -0.74
HIST1H2BDP58876 AC023141.13-201ENST00000604991 943 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms