Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 URAHP-205ENST00000610227 398 ntBASIC13.37□□□□□ -0.27
CLDN6P56747 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDN6P56747 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDN6P56747 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDN6P56747 AC008536.3-201ENST00000623282 1599 ntBASIC13.37□□□□□ -0.27
CLDN6P56747 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDN6P56747 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN6P56747 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 GRK6P1-201ENST00000400595 1711 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN6P56747 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN6P56747 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN6P56747 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
CLDN6P56747 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLDN6P56747 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 AC073210.1-201ENST00000414799 232 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 RN7SL128P-201ENST00000467883 305 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 BCL2L12P1-201ENST00000508390 733 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 AC022447.6-201ENST00000515522 438 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 MIR4254-201ENST00000581063 76 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 TYMSP2-201ENST00000589501 424 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 KF455155.1-201ENST00000604493 303 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 AC087386.2-201ENST00000623212 4637 ntBASIC13.36□□□□□ -0.27
CLDN6P56747 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN6P56747 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN6P56747 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN6P56747 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLDN6P56747 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN6P56747 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 CICP4-201ENST00000447359 2812 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN6P56747 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN6P56747 AL157823.1-201ENST00000403727 628 ntBASIC13.35□□□□□ -0.27
CLDN6P56747 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN6P56747 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms