Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC10.25□□□□□ -0.77
APOC4P55056 ACTG1P19-201ENST00000418987 1116 ntBASIC10.25□□□□□ -0.77
APOC4P55056 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC10.25□□□□□ -0.77
APOC4P55056 AC004837.1-201ENST00000446267 564 ntBASIC10.25□□□□□ -0.77
APOC4P55056 KRT18P62-201ENST00000446618 1287 ntBASIC10.25□□□□□ -0.77
APOC4P55056 LDHBP1-201ENST00000455730 1119 ntBASIC10.25□□□□□ -0.77
APOC4P55056 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC10.25□□□□□ -0.77
APOC4P55056 AC093300.1-201ENST00000510368 1201 ntBASIC10.25□□□□□ -0.77
APOC4P55056 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
APOC4P55056 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 MIR4750-201ENST00000584564 56 ntBASIC10.25□□□□□ -0.77
APOC4P55056 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC10.25□□□□□ -0.77
APOC4P55056 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 BAP1-211ENST00000615113 489 ntBASIC10.25□□□□□ -0.77
APOC4P55056 MIR6858-201ENST00000620733 67 ntBASIC10.25□□□□□ -0.77
APOC4P55056 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.25□□□□□ -0.77
APOC4P55056 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 AC090502.4-201ENST00000551714 1386 ntBASIC10.25□□□□□ -0.77
APOC4P55056 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC10.25□□□□□ -0.77
APOC4P55056 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
APOC4P55056 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 AC152010.1-201ENST00000415779 2006 ntBASIC10.24□□□□□ -0.77
APOC4P55056 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 AC019109.1-201ENST00000401725 1874 ntBASIC10.24□□□□□ -0.77
APOC4P55056 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 SSR4-202ENST00000370085 526 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
APOC4P55056 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 DKKL1P1-201ENST00000400550 698 ntBASIC10.24□□□□□ -0.77
APOC4P55056 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
APOC4P55056 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC10.24□□□□□ -0.77
APOC4P55056 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 RN7SL818P-201ENST00000485099 259 ntBASIC10.24□□□□□ -0.77
APOC4P55056 RN7SL375P-201ENST00000492442 298 ntBASIC10.24□□□□□ -0.77
APOC4P55056 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.24□□□□□ -0.77
APOC4P55056 VENTXP3-201ENST00000546480 773 ntBASIC10.24□□□□□ -0.77
APOC4P55056 KRT18P8-201ENST00000581937 1246 ntBASIC10.24□□□□□ -0.77
APOC4P55056 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC10.24□□□□□ -0.77
APOC4P55056 AC012073.1-201ENST00000606114 1108 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms