Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NXPE4-201ENST00000375478 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC23.82■■□□□ 1.4
SMARCA4P51532 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC23.82■■□□□ 1.4
SMARCA4P51532 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 AL391822.1-201ENST00000452580 562 ntBASIC23.82■■□□□ 1.4
SMARCA4P51532 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC23.82■■□□□ 1.4
SMARCA4P51532 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 AC103706.1-201ENST00000561761 679 ntBASIC23.82■■□□□ 1.4
SMARCA4P51532 IGHV1OR16-3-201ENST00000568138 205 ntBASIC23.82■■□□□ 1.4
SMARCA4P51532 RN7SL460P-201ENST00000582806 258 ntBASIC23.82■■□□□ 1.4
SMARCA4P51532 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC23.82■■□□□ 1.4
SMARCA4P51532 CALM3-206ENST00000594523 540 ntTSL 4 BASIC23.82■■□□□ 1.4
SMARCA4P51532 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 AC009093.9-201ENST00000566038 1611 ntBASIC23.82■■□□□ 1.4
SMARCA4P51532 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC23.82■■□□□ 1.4
SMARCA4P51532 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMARCA4P51532 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 RN7SL363P-201ENST00000482412 273 ntBASIC23.81■■□□□ 1.4
SMARCA4P51532 JPT2-214ENST00000569765 782 ntTSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC23.81■■□□□ 1.4
SMARCA4P51532 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCA4P51532 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 AC023830.3-201ENST00000612995 1455 ntBASIC23.81■■□□□ 1.4
SMARCA4P51532 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCA4P51532 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCA4P51532 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
SMARCA4P51532 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SMARCA4P51532 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SMARCA4P51532 ZNF493-208ENST00000599461 1769 ntBASIC23.81■■□□□ 1.4
SMARCA4P51532 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC23.81■■□□□ 1.4
SMARCA4P51532 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 TRIM15-206ENST00000376688 426 ntTSL 5 BASIC23.81■■□□□ 1.4
SMARCA4P51532 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC23.81■■□□□ 1.4
SMARCA4P51532 BCRP5-201ENST00000514371 253 ntBASIC23.81■■□□□ 1.4
SMARCA4P51532 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMARCA4P51532 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC23.81■■□□□ 1.4
SMARCA4P51532 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 KRT18P40-201ENST00000599859 1571 ntBASIC23.8■■□□□ 1.4
SMARCA4P51532 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SMARCA4P51532 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 FTH1P19-201ENST00000402402 528 ntBASIC23.8■■□□□ 1.4
SMARCA4P51532 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 FAM213AP2-201ENST00000521579 683 ntBASIC23.8■■□□□ 1.4
SMARCA4P51532 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AKR1B1P3-201ENST00000525311 588 ntBASIC23.8■■□□□ 1.4
SMARCA4P51532 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 AC079601.2-201ENST00000547729 775 ntBASIC23.8■■□□□ 1.4
SMARCA4P51532 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 PMM2-216ENST00000569958 698 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC23.8■■□□□ 1.4
SMARCA4P51532 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SMARCA4P51532 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMARCA4P51532 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms