Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 LINC00638-201ENST00000555578 2518 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.27□□□□□ -0.12
FDFT1P37268 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.27□□□□□ -0.12
FDFT1P37268 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.27□□□□□ -0.12
FDFT1P37268 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
FDFT1P37268 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.27□□□□□ -0.12
FDFT1P37268 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FDFT1P37268 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 AC044849.1-201ENST00000519737 1188 ntBASIC14.27□□□□□ -0.13
FDFT1P37268 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.27□□□□□ -0.13
FDFT1P37268 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
FDFT1P37268 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
FDFT1P37268 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 AL118506.1-201ENST00000601296 3082 ntBASIC14.27□□□□□ -0.13
FDFT1P37268 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
FDFT1P37268 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.27□□□□□ -0.13
FDFT1P37268 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FDFT1P37268 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 AF013593.1-201ENST00000458074 1487 ntBASIC14.26□□□□□ -0.13
FDFT1P37268 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 AC067931.2-201ENST00000623655 2003 ntBASIC14.26□□□□□ -0.13
FDFT1P37268 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.26□□□□□ -0.13
FDFT1P37268 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.26□□□□□ -0.13
FDFT1P37268 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.26□□□□□ -0.13
FDFT1P37268 SLC25A15P3-201ENST00000505530 290 ntBASIC14.26□□□□□ -0.13
FDFT1P37268 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
FDFT1P37268 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 AL008638.5-201ENST00000623814 1298 ntBASIC14.26□□□□□ -0.13
FDFT1P37268 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FDFT1P37268 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FDFT1P37268 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.26□□□□□ -0.13
FDFT1P37268 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms