Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC16.96■□□□□ 0.31
PDE6BP35913 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.96■□□□□ 0.31
PDE6BP35913 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 RBM14-205ENST00000443702 732 ntTSL 3 BASIC16.96■□□□□ 0.31
PDE6BP35913 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 AC106782.5-201ENST00000616011 337 ntBASIC16.96■□□□□ 0.31
PDE6BP35913 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.96■□□□□ 0.31
PDE6BP35913 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.96■□□□□ 0.31
PDE6BP35913 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDE6BP35913 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6BP35913 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PDE6BP35913 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PDE6BP35913 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PDE6BP35913 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PDE6BP35913 AC040160.2-201ENST00000623816 1675 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 AF013593.1-201ENST00000458074 1487 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PDE6BP35913 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PDE6BP35913 OLA1P2-201ENST00000395519 1264 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.95■□□□□ 0.3
PDE6BP35913 YY1P2-201ENST00000438766 948 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC16.95■□□□□ 0.3
PDE6BP35913 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.95■□□□□ 0.3
PDE6BP35913 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 METTL7AP1-201ENST00000547343 496 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PDE6BP35913 ACTBP9-201ENST00000587663 1099 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.95■□□□□ 0.3
PDE6BP35913 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.95■□□□□ 0.3
PDE6BP35913 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.95■□□□□ 0.3
PDE6BP35913 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDE6BP35913 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6BP35913 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6BP35913 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6BP35913 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 HSPA7-201ENST00000445535 1927 ntBASIC16.94■□□□□ 0.3
PDE6BP35913 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PDE6BP35913 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.94■□□□□ 0.3
PDE6BP35913 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PDE6BP35913 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDE6BP35913 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6BP35913 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PDE6BP35913 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PDE6BP35913 TUBB2BP1-201ENST00000404155 871 ntBASIC16.94■□□□□ 0.3
PDE6BP35913 FTH1P18-201ENST00000412071 549 ntBASIC16.94■□□□□ 0.3
PDE6BP35913 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms