Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ZNF259P1-201ENST00000407656 1365 ntBASIC10.77□□□□□ -0.69
RAB4AP20338 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RAB4AP20338 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 CETN4P-206ENST00000642099 2168 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 TNKS-213ENST00000522110 2900 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 MARK2P9-201ENST00000430958 1727 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 KRT18P32-201ENST00000424695 1287 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB4AP20338 GAPDHP40-201ENST00000505218 1006 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB4AP20338 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB4AP20338 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 GPX4-206ENST00000588919 803 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.76□□□□□ -0.69
RAB4AP20338 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 AC026271.4-201ENST00000578214 1833 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 AGAP12P-201ENST00000585227 2359 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB4AP20338 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.76□□□□□ -0.69
RAB4AP20338 AL136172.1-201ENST00000598590 1394 ntBASIC10.76□□□□□ -0.69
RAB4AP20338 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB4AP20338 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB4AP20338 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB4AP20338 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
RAB4AP20338 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 RAB7B-201ENST00000617070 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 MASP1-203ENST00000337774 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 SACS-202ENST00000402364 15134 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 COL5A2-203ENST00000618828 6399 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB4AP20338 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.75□□□□□ -0.69
RAB4AP20338 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
RAB4AP20338 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RAB4AP20338 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
RAB4AP20338 AC023274.1-201ENST00000418278 595 ntBASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms