Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ERCC3P19447 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC3P19447 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC3P19447 SLC25A15P3-201ENST00000505530 290 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.2■□□□□ 0.18
ERCC3P19447 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.2■□□□□ 0.18
ERCC3P19447 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.2■□□□□ 0.18
ERCC3P19447 RN7SL455P-201ENST00000580629 282 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 MIR4265-201ENST00000582152 99 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.2■□□□□ 0.18
ERCC3P19447 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A21P-201ENST00000510875 1396 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A15P-201ENST00000514465 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A6P-201ENST00000515148 1394 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A16P-201ENST00000526662 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A9P-201ENST00000527940 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A5P-201ENST00000528738 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A14P-201ENST00000530386 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 FAM90A13P-201ENST00000534703 1395 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 MST1P2-201ENST00000457982 2291 ntBASIC16.2■□□□□ 0.18
ERCC3P19447 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERCC3P19447 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ERCC3P19447 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC3P19447 OR52M2P-201ENST00000414298 959 ntBASIC16.19■□□□□ 0.18
ERCC3P19447 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC3P19447 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.19■□□□□ 0.18
ERCC3P19447 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.19■□□□□ 0.18
ERCC3P19447 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERCC3P19447 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
ERCC3P19447 PDXDC2P-206ENST00000534700 1315 ntBASIC16.19■□□□□ 0.18
ERCC3P19447 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ERCC3P19447 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
ERCC3P19447 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 RPL13AP3-202ENST00000494676 1473 ntBASIC16.18■□□□□ 0.18
ERCC3P19447 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ERCC3P19447 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERCC3P19447 LINC02486-201ENST00000604157 3000 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms