Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 AC139143.1-201ENST00000441772 1207 ntBASIC18.72■□□□□ 0.59
ATF3P18847 TULP3P1-202ENST00000453253 1291 ntBASIC18.72■□□□□ 0.59
ATF3P18847 RN7SL479P-201ENST00000472003 300 ntBASIC18.72■□□□□ 0.59
ATF3P18847 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC18.72■□□□□ 0.59
ATF3P18847 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC18.72■□□□□ 0.59
ATF3P18847 AC063977.2-201ENST00000601996 421 ntBASIC18.72■□□□□ 0.59
ATF3P18847 AC136475.9-201ENST00000605240 497 ntBASIC18.72■□□□□ 0.59
ATF3P18847 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF3P18847 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.72■□□□□ 0.59
ATF3P18847 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATF3P18847 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF3P18847 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC18.72■□□□□ 0.59
ATF3P18847 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF3P18847 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATF3P18847 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.72■□□□□ 0.59
ATF3P18847 RCC2P5-201ENST00000492126 1487 ntBASIC18.71■□□□□ 0.59
ATF3P18847 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 AC008267.3-201ENST00000448776 712 ntBASIC18.71■□□□□ 0.59
ATF3P18847 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC18.71■□□□□ 0.59
ATF3P18847 CXXC1P1-202ENST00000489409 1212 ntBASIC18.71■□□□□ 0.59
ATF3P18847 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC18.71■□□□□ 0.59
ATF3P18847 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC18.71■□□□□ 0.59
ATF3P18847 MIR4526-201ENST00000583168 87 ntBASIC18.71■□□□□ 0.59
ATF3P18847 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 AC117500.5-201ENST00000623233 527 ntBASIC18.71■□□□□ 0.59
ATF3P18847 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 AC073347.1-201ENST00000421633 2643 ntBASIC18.71■□□□□ 0.59
ATF3P18847 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 TP73-207ENST00000378290 1831 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATF3P18847 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF3P18847 AC061965.1-201ENST00000560524 1465 ntBASIC18.71■□□□□ 0.59
ATF3P18847 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF3P18847 PCDHA3-202ENST00000532566 4594 ntBASIC18.71■□□□□ 0.59
ATF3P18847 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ATF3P18847 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 ATF4P4-201ENST00000393544 1930 ntBASIC18.7■□□□□ 0.58
ATF3P18847 HSPA7-201ENST00000445535 1927 ntBASIC18.7■□□□□ 0.58
ATF3P18847 BX640514.1-201ENST00000583223 1918 ntBASIC18.7■□□□□ 0.58
ATF3P18847 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 AC034205.3-201ENST00000603595 1376 ntBASIC18.7■□□□□ 0.58
ATF3P18847 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 HNRNPABP1-201ENST00000406003 734 ntBASIC18.7■□□□□ 0.58
ATF3P18847 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 AC000078.1-201ENST00000420617 682 ntBASIC18.7■□□□□ 0.58
ATF3P18847 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.7■□□□□ 0.58
ATF3P18847 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATF3P18847 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC18.7■□□□□ 0.58
ATF3P18847 PIGCP1-201ENST00000527583 895 ntBASIC18.7■□□□□ 0.58
ATF3P18847 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC18.7■□□□□ 0.58
ATF3P18847 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC18.7■□□□□ 0.58
ATF3P18847 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms