Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC175P0C221 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC175P0C221 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC175P0C221 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC175P0C221 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 E2F3P2-201ENST00000447755 1422 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC175P0C221 INGX-202ENST00000489074 768 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 GOLGA2P8-201ENST00000505201 779 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 RFPL4AP1-201ENST00000530883 850 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC175P0C221 DUX4L46-201ENST00000566845 751 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC175P0C221 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC175P0C221 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC175P0C221 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC175P0C221 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 AC006453.4-201ENST00000636949 1252 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC175P0C221 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 AC008040.5-201ENST00000599781 1781 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC175P0C221 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 PCDHB17P-202ENST00000623466 3066 ntBASIC15.13■□□□□ 0.01
CCDC175P0C221 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC175P0C221 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC093462.1-201ENST00000621167 1683 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC175P0C221 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC175P0C221 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC175P0C221 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AOC4P-203ENST00000566825 2289 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.12■□□□□ 0.01
CCDC175P0C221 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 FAM197Y7-201ENST00000432892 766 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC175P0C221 CHMP1AP1-201ENST00000445563 662 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC010319.3-201ENST00000597028 470 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AL591163.1-201ENST00000641757 987 ntBASIC15.12■□□□□ 0.01
CCDC175P0C221 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC175P0C221 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC175P0C221 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC175P0C221 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC175P0C221 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CCDC175P0C221 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC175P0C221 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC175P0C221 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC175P0C221 AC110048.1-201ENST00000604293 2157 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms