Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.67□□□□□ -0.38
FREM3P0C091 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 AC090502.4-201ENST00000551714 1386 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
FREM3P0C091 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
FREM3P0C091 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 OR52M2P-201ENST00000414298 959 ntBASIC12.67□□□□□ -0.38
FREM3P0C091 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.67□□□□□ -0.38
FREM3P0C091 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.67□□□□□ -0.38
FREM3P0C091 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.67□□□□□ -0.38
FREM3P0C091 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.67□□□□□ -0.38
FREM3P0C091 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
FREM3P0C091 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
FREM3P0C091 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.66□□□□□ -0.38
FREM3P0C091 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC12.66□□□□□ -0.38
FREM3P0C091 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.66□□□□□ -0.38
FREM3P0C091 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 AC025271.4-201ENST00000621477 1726 ntBASIC12.66□□□□□ -0.38
FREM3P0C091 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
FREM3P0C091 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.66□□□□□ -0.38
FREM3P0C091 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.66□□□□□ -0.38
FREM3P0C091 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
FREM3P0C091 RN7SL470P-201ENST00000583069 259 ntBASIC12.66□□□□□ -0.38
FREM3P0C091 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
FREM3P0C091 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
FREM3P0C091 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 AC020658.7-201ENST00000624274 2442 ntBASIC12.66□□□□□ -0.38
FREM3P0C091 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.66□□□□□ -0.38
FREM3P0C091 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
FREM3P0C091 RPL13AP3-202ENST00000494676 1473 ntBASIC12.65□□□□□ -0.38
FREM3P0C091 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.65□□□□□ -0.38
FREM3P0C091 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
FREM3P0C091 AC006529.1-201ENST00000459978 637 ntBASIC12.65□□□□□ -0.38
FREM3P0C091 PTK2-225ENST00000520892 571 ntTSL 4 BASIC12.65□□□□□ -0.38
FREM3P0C091 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
FREM3P0C091 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms